Lycium barbarum (goji berry): 132627986
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Entry
132627986 CDS
T09483
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132627986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132627986
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
132627986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
132627986
NCBI-ProteinID:
XP_060199633
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Position
1:779668..786944
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AA seq
474 aa
AA seq
DB search
MMESDLGKLFIGGISWDTDEDRLREYFRSYGEVVEAVIMRDRNTGRARGFGFVVFADPTV
AERVVKEKHMIDGRTVEAKKAVPRDDQQIINRNNSSIQGSPGPGRTKKLFVGGLASTVTE
SDFKTYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRALYKTFHELNGKMVEVK
RAVPKELSPALGPRSPLVGYNYGLNRANNFLNNYAAQGYNLASVGGYGVRMDGRFSPVAG
ARAGFSQFASPAYGMGVNLDPALSPTFAGASNFNNNLGYGRILNPYFGGNSSRYSTTPIG
YSTSGNRGDSFLSSPTRNLWGNIGLGLNTSANSGGPGSFVGSGSGNYGVFANNSANWGSL
ISAPGGNSSGYGGGNNYGLGSGGLGRNNAAGPATTSSFTVSTGVTYEGSYGDQFRGGASV
YGDRTWQGVSSDADGSSSFEYGLGNPADVSAKDSEDYIGNYSIANRQSNRGIAA
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgatggagtcagatctgggtaagctattcataggtgggatttcttgggacacggatgag
gatcgtcttagagaatatttcaggtcatatggagaagtggtggaagctgtgatcatgagg
gatcgtaatactggtcgtgctcgtggttttggttttgttgtctttgccgatcctactgtt
gctgaaagagtagttaaggagaaacacatgattgacgggcgaacggttgaggcaaagaag
gctgttcctagggatgatcaacaaataataaatagaaacaatagcagcattcaaggatct
ccaggtcctggacgcaccaaaaagctatttgtaggaggcttagcatctactgttaccgag
agtgatttcaagacatatttcgatcagtttggtacaattacagatgtcgtagtgatgtat
gaccataatactcagaggccaagagggtttggatttataacttatgattcggaggaagca
gttgatagggcattgtataagacttttcatgaactaaatggtaaaatggttgaagtaaag
cgggccgtgccgaaggagctatctcccgcactgggcccccgcagcccgctcgtgggatac
aattacggactcaatagagccaacaatttcctcaacaactatgctgctcaggggtataat
ctagcatcggttggaggatacggggtccgcatggatggaaggtttagtccagttgccggt
gctcgtgctggtttctctcagtttgcttctccagcttatggaatgggtgtaaatttggac
ccagctttgagccctacatttgcaggagcgtccaactttaacaataatcttggttatggg
cgaatactgaacccgtattttggtggaaattcaagcagatacagtactactcctattgga
tatagcacaagcggaaatagaggggattcttttctaagctcccctaccaggaatttatgg
ggaaatattggccttggcctcaacacttcagcaaattctggtgggccaggttcatttgtg
gggtccggaagtggaaattatggcgtcttcgcgaataacagtgctaattggggttctctt
atttctgctccgggtggtaattcttctggatatggtggtgggaataattatgggctggga
tctggaggacttggaagaaacaatgcagcgggtcctgctacaacttcatcgtttacagta
tcaactggtgttacttacgaggggtcttatggagatcaattccggggcggtgcttcggtg
tatggtgatcgaacttggcaaggtgtttcttctgatgcagatggttctagttcatttgaa
tatggtcttggaaatccagcagatgtttcagctaaagattctgaggattatatcggaaat
tatagtattgcaaatagacaatcgaatagaggaattgcagcatag
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