Lycium barbarum (goji berry): 132628116
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Entry
132628116 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132628116 isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132628116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132628116
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
132628116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
132628116
NCBI-ProteinID:
XP_060199831
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Position
1:complement(924454..937288)
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AA seq
323 aa
AA seq
DB search
MTKLPQSLPIASYGGGGGGGGIGGGASSSGGGAPANKDRKMQLAEQLVLDLRNPDRREDA
LLKLSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQ
CVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFL
LSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVARVLGNMVG
ALAEQPSSRLLKHIIRCYLRLSDNVRACDALRSCLPDMLRDTTFSSCLREDPTTRRWLQQ
LIHNVNGNRVALQAGGFDHMLVN
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaattacctcagtctctcccaatcgccagttatggtggcggcggaggaggtggc
ggaataggcggtggcgcgtcgtcttctggtggcggagctccggcgaataaagatcgcaaa
atgcaattggctgaacaacttgtgcttgatcttaggaaccctgatcgccgtgaagacgct
cttttaaaactttctaagaagagggaacttttccaggatttggcccccttgttgtggaac
tcatttggtactatcgctgcactcctacaggagatagtttccatctaccctgttttgtcg
ccgccaaacctgactcctgcccaatccaatagggtttgtaatgcactagcacttcttcag
tgcgtagcctctcatcctgacaccagaatgttgttcctcaatgctcatattcctttgtat
ttgtacccttttcttaatacaacaagcaagtcaagaccttttgaatatttgaggcttact
agcttaggtgtcattggtgccctcgtgaaggtagatgacactgaagttatcagttttctt
ctctctacagagataattcccctgtgcttgcgcacgatggagatggggagtgaactatca
aaaacagttgcaactttcattgtgcaaaaaatccttcttgatgatgtgggtctggattac
atctgtaccacagcggaaaggttttttgctgtagcccgagttttagggaatatggtcggt
gcacttgctgaacagccttcatcaagattgctgaaacacataattaggtgctatcttcgt
ttgtcggataatgtgagggcatgtgatgcactgagaagttgtcttcccgatatgcttagg
gataccaccttcagcagttgtcttcgtgaggatccaacgacgaggaggtggctgcaacaa
ttgatccataacgttaatgggaatcgggttgctctacaggcaggaggatttgatcatatg
ctggtgaactga
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