Lycium barbarum (goji berry): 132628171
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Entry
132628171 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132628171 isoform X1
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbb03016
]
132628171
Enzymes [BR:
lbb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
132628171
Transfer RNA biogenesis [BR:
lbb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
132628171
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Motif
Other DBs
NCBI-GeneID:
132628171
NCBI-ProteinID:
XP_060199898
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All DBs
Position
2:complement(151743862..151751545)
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AA seq
565 aa
AA seq
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MASEIEVNAVKHMSWAEEEDKLRLLREAVNALPVNAVKDLWSIGACVRCIFRVFGLHELM
CAHPLLSISKWCDILEDVMRKKDVDTADHPQTDGEFSNEQSHQERSRETRFCKICLGILQ
FLYYDDTGTLLKKYSADDFALVIAELVKKQYQQIDSFSLEVSLPSAVTENDEAVWLYMKN
KYHHELWFQEKAECQFISTKDILKLLVINPLQRLLGVKSSQSTFRIRLTYSHSDSLTRDD
VQEGNVGNKRRKTDKAGSTGDLKITGESVTPHVESSDSSVGDGDAHTKVRPKESRDFSCS
FLMAQLDKVSKPCCLNIHCCRSSIYLGGRYLKYSRNVSQTRWVIDDERMGEASVEEIVGG
AILPVFQGDNYKFHAAGREDIDVRMLGTGRPFLVEIQNARQVPSEALIKEIERKINCLES
QYVRVKNLRAVGSKGWDLMREGESEKQKQYAALVWISRPVSNEDLETISSLKELKVAQNT
PIRVLHRRSPLERERIIHWMKVERISGSSQYLLLHLCTQAGTYIKEFVHGDLGRTQPSIG
SILGCRTEILQLDVTDVKMDCFQED
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgaaatagaggttaacgccgtcaaacacatgagttgggctgaggaagaggat
aagttacgtcttctccgtgaagccgtcaatgccctgcctgttaacgccgttaaagattta
tggtccattggggcatgcgttcgatgcatttttcgagtatttggacttcacgaactcatg
tgtgcacatcctttactctcaatatcaaagtggtgtgatattttagaagatgttatgaga
aagaaagacgttgacacagctgatcatccccaaacagatggagaatttagtaatgagcaa
tcacatcaagaaagatcaagggagactaggttttgcaaaatttgcttaggcattttgcaa
tttctctattatgatgatactggaactttattgaaaaagtatagtgccgatgattttgct
ttagttattgctgaacttgtaaagaaacaatatcaacaaattgacagtttttctcttgaa
gtctcattaccttcggctgtaacagaaaatgatgaagcagtctggttgtatatgaaaaat
aagtaccaccatgaactttggttccaagagaaggctgaatgtcaattcatttctacaaaa
gacatcttgaaattattagtgataaatccattacaaagattgttgggtgtaaaatctagt
caaagtacttttcgcattcgcttaacatactcacattctgattcattaacaagagatgac
gttcaggaaggaaatgtaggaaataagaggaggaaaacagacaaagcaggttccactggt
gacctcaagataactggggaatctgttactccccatgttgagtcttctgatagctctgtt
ggtgatggagatgcacacactaaagttcgtcccaaggagtcccgagatttcagttgtagt
ttcttaatggctcagttagataaggtcagtaagccttgttgtctgaacattcattgttgt
agaagctctatatatcttggagggagatatcttaagtattcaagaaatgtcagccagaca
cgctgggttattgatgatgaacgaatgggagaagcatccgttgaggaaatagtaggtggg
gccatccttcctgtcttccagggtgacaattataagtttcatgctgctggtagggaggac
attgatgtccggatgctaggtacaggccgtccttttctggtagagatacaaaatgcacgc
caagtcccttctgaagctctcataaaagaaatagagaggaaaattaattgtctagaaagt
caatatgtccgggttaaaaatcttagagctgtaggtagtaaagggtgggacctcatgcgt
gaaggagagtcggagaagcagaagcagtacgctgcattggtgtggatttctcgtcctgtc
agcaatgaagatttggaaactatatcatcactaaaggaattgaaagtggctcaaaacacg
cctataagggttcttcatcgccgaagtccattggagagagagagaattatacattggatg
aaagtggagaggatatctggaagctcacaatatcttctattgcatctgtgtactcaggct
gggacgtatatcaaagaatttgttcatggggatttaggtcgcactcaacccagtattggt
tcaattcttggttgcagaacagagatattgcaactagatgttacggacgtgaaaatggac
tgctttcaggaggattga
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