Lycium barbarum (goji berry): 132628258
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Entry
132628258 CDS
T09483
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132628258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbb03021
]
132628258
03036 Chromosome and associated proteins [BR:
lbb03036
]
132628258
Transcription machinery [BR:
lbb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132628258
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132628258
PBAF complex
132628258
GBAF(ncBAF) complex
132628258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
PLATZ
SWIRM-assoc_1
Motif
Other DBs
NCBI-GeneID:
132628258
NCBI-ProteinID:
XP_060200020
LinkDB
All DBs
Position
2:complement(152879203..152882750)
Genome browser
AA seq
488 aa
AA seq
DB search
MAEAGESKSPAIKADPETTSPPQAEPPQTPSQPPQTEVLPAKQLESSPNPTATTEQPDFV
YIPTYSRWFSWNSIHECEVRFLPEFFDGRSPSKNPKTYKYYRNTIIRRFRDNPTKKLTFT
EARKTIVGDVGSIRRVFDFLDTWGLINYTANSSKSLKWEEKESKSTSASAQQNSEPNGTS
TDLTVPKKRLCNACKTVCSIACFASDKHDLTLCARCYVRNNYRVGLNSSDFRRVEISEEV
KTDWTDKETLHLLEALMHYGDDWKKVAEHVGGRSPKECVARFVKLPFGEQFVGPPESAEV
DGELGSETMYLPSKRMRLTPLADASNPIMAQAAFLSALAGKEVAELAAHAAVTALSEIGE
GITKGRLGSLPSGVEKQESDGTSNGYAKDTLESTLVEAKAQLEKEELDLERGVSNVAIEA
KEIEDRIAHFEERDLQVEKEWQQLMQLKNLIFTDQLTLLLNEAGAPKAGETIGEELISVK
AECQIPLV
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagccggcgaaagcaagtcaccggcaattaaagccgaccctgaaactacctct
ccgccacaagcagaaccaccacaaacaccatcgcagccacctcaaacggaagttttgcca
gcaaagcaattggaatcctccccaaaccccaccgccaccaccgagcagcctgatttcgtc
tatattcccacctattctcgttggttttcatggaatagcattcatgaatgtgaggttcgt
tttcttcctgagttcttcgacggaagatcaccttctaagaaccctaagacttacaaatac
tataggaataccattattcgtagatttagagataaccccactaaaaaactcacctttact
gaggctcgcaagactattgttggagacgtcggttcaattcgtagggttttcgatttcttg
gacacatggggtttgattaattacactgctaactcttccaagtctctcaagtgggaagaa
aaagagtcaaagtcaacatctgcttctgctcagcaaaacagtgaacctaatggaacttcc
actgatcttactgttcctaaaaaaagactctgcaatgcctgtaaaactgtttgcagcatt
gcctgtttcgcgtctgataagcatgatttgactctttgtgcaagatgctatgttcgtaat
aattacagagtcggcctcaattcttcagattttcggcgagttgagattagtgaagaagtt
aagacagattggactgacaaagagactttgcaccttttagaagctcttatgcattatggc
gatgattggaagaaggttgctgagcatgttggtggtagaagcccgaaggaatgtgtggct
cgatttgtgaagcttccttttggtgagcagtttgtgggccctcctgaatctgcagaagtg
gatggtgaactcgggtctgaaactatgtatcttccatccaagagaatgcgcctcacaccc
cttgctgatgcaagcaacccaattatggctcaggctgctttcctctctgctcttgcagga
aaagaggttgcagaattggcagcacatgccgctgttacagctctgtctgagattggtgag
ggaataactaaagggaggctaggatcactaccctctggtgtggagaagcaagaatcggat
ggcacttccaatgggtatgcgaaggatacccttgaaagtactcttgttgaagcgaaggct
cagctggagaaggaggaacttgacctggagagaggcgtctctaatgtggcaattgaggcc
aaggagattgaggacagaattgctcattttgaggaacgtgatttacaggtggaaaaagag
tggcaacagctgatgcagctgaagaacctgatcttcactgatcaacttactttgctgcta
aacgaagctggtgctccaaaagctggagaaaccattggggaggaactgataagtgttaag
gcagaatgccaaatccccttggtataa
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