Lycium barbarum (goji berry): 132629761
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Entry
132629761 CDS
T09483
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL7-like
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132629761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132629761
Enzymes [BR:
lbb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
132629761
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
HECT type E3
132629761
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HECT
DUF7077
Motif
Other DBs
NCBI-GeneID:
132629761
NCBI-ProteinID:
XP_060201098
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All DBs
Position
3:complement(3591470..3599218)
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AA seq
849 aa
AA seq
DB search
MSKEQILKDMSDMDQMTSFSHDRVMPPVGWALGNFIYLATGSESNILDSGKLVSEPCNLN
ELESRTHKLQILAPPLSGIDRQSYVRVVITLAEKLLTQIERAGWVRKENQEVQGDGNSVE
AEKTFGSLQMSYMDLFKPVCLQKHLMELLVLEKDGLIQRAESLPSCGAESSGSCELLDVA
YYYSWMLRIFSSLNPLLGAMPVLNMLSFTPGFLSNLWGTLEESLFPGKNLVGKGKYVEES
KISERKQKHSSKDIGSKWASVFQKITGKSQTEFKSLDRLDGKSNTVHIDEHYSDMWDIEL
LRQGPDGISKDLACLLHLFCASYSHLLLVLDDQEFYEKQVPFTLEQQQKIVSVLNTLAYN
TMAHNIGPESRPLTDSAIKCLHLLYERDCRHQFCPPTLWLSPGRNNRPPIAVAARTHEVL
SATSNGDDALTSLSMGSIITVTPHIFPFEESRVEMFREFINMDKVSRKMAGEVVGPGPRN
VEIVIRRGHIVEDGFQQLNNLGSRLKSSIHVSFVNEFGLPEAGLDYGGLSKEFLTEIAKA
AFSPEYGLFTQTLTSDRHLIPNTAARFLDNGFQMIEFLGRIVGKALYEGILLDYSFSHVF
LQKLLGRYSFLDELSTLDPELYRNLMFVKHYDGDVKDLALDFTVTEESLGKHIVIELKPG
GKDISVTKENMLQYVHAMTDFKLNRLILAFSNAFYRGLTDLISPSWLKLFNASEFKQLLS
GGNHDIDIDDLRKNTRYTGGYTEGSRTVXLFWEVFANFEPKVRCLLLKFVTSCSRAPLLG
FKHLQPTFTIHKVSCDLPLFSTFGGQDVDRLPSASTCYNTLKLPTYKRQSTLRAKLLYAI
NSNAGFELS
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaggagcaaattttaaaggatatgtcagatatggatcagatgacaagtttttct
cacgacagggtgatgccaccagttggttgggctcttggaaattttatataccttgctact
ggcagtgaaagcaatatcttagattctggaaagttagtgtctgaaccctgtaacttaaac
gaattagaatcccgaacccacaagcttcaaatcctagctccgcctctgtctggtatagac
cgtcaatcctatgtccgtgtagtaattacgctggcggagaaattattgactcagattgaa
agggctggatgggtgagaaaggagaaccaagaagttcaaggtgacggaaattctgttgaa
gccgagaaaacttttggatccttgcagatgtcgtatatggacctttttaagcctgtttgc
ctgcagaagcatcttatggaacttctagtgttggagaaagatggtctcattcagagagct
gaaagtctaccctcatgcggagcagaatcttctgggagctgtgaattgcttgatgttgct
tactactattcatggatgctcaggatattttctagtttgaatccgctgctgggggcaatg
ccagttctcaacatgctatcatttactcctgggttcctttctaacctgtggggaaccctc
gaagaatcactttttcctggaaagaatcttgttggtaagggcaaatatgtggaagaaagt
aaaatttctgagagaaagcaaaaacattcttctaaagatataggcagcaaatgggctagc
gtatttcaaaagataactgggaaatcacaaactgagttcaaaagtctggatcggcttgat
ggaaaatcaaatacagtgcatattgacgagcattattctgatatgtgggacattgaactg
ctaaggcagggtcctgatggcatatcaaaagatttggcttgtctactacatctgttttgc
gctagttattcacacctgttgttagttcttgatgaccaggagttttatgagaaacaggtt
ccctttacattggagcagcagcagaaaattgtgtccgtgctgaatacattggcttataac
acaatggcgcacaatattggtcctgaaagtagacctctgacagattctgctatcaaatgt
cttcatttattgtatgaaagggattgcaggcaccaattttgccctcctactttgtggctt
tcaccaggtagaaataatcggccgcccattgccgtagctgctaggactcatgaagttttg
tcagctacttcaaacggtgatgatgcattaacctctctgagcatgggctccatcattact
gttaccccacacattttcccatttgaggaaagcagggttgagatgttcagagaattcatc
aacatggacaaagtatcaagaaaaatggccggtgaagttgttggacctggtccacgtaat
gttgagatagtaattcgtcgtggtcatattgttgaagatggatttcagcaactaaataac
ttaggatcaaggttaaagtccagcatccacgtctctttcgtgaatgagtttggtcttcca
gaggctggcctggactacggtgggttgtccaaggaattcttgaccgaaatagccaaagca
gccttctcacctgagtacgggctcttcacacagaccttgacctcagacagacatctaatt
cctaatacagctgcaagatttttggacaatggatttcagatgattgagtttctagggaga
attgttggcaaagcgctctatgagggaatattgctagattattccttttcacatgtattt
ttgcaaaagctgttgggccgctatagctttcttgatgaattatctacacttgatcctgag
ctatacaggaatctgatgtttgttaagcactatgatggtgatgtcaaggacctcgcattg
gattttacagttactgaagaatcattaggaaaacacattgttattgagcttaaacctggt
ggcaaggatatctctgtaacaaaagagaacatgttgcaatatgttcatgcaatgacagat
tttaaactaaatcggctgatacttgctttctcaaatgcattttatagaggattgacagac
cttatatctccttcctggttaaagttgtttaatgcaagtgaatttaagcagttgctttca
gggggaaaccatgatattgacattgatgatttaaggaaaaatacacgctatactggaggt
tacacagaagggagtcggacagtgnnactcttttgggaggtctttgcgaattttgaacca
aaagtacggtgtttgctgcttaagtttgtgacgagttgttcgcgagctcctttgcttgga
ttcaaacatctgcagccaaccttcaccattcacaaggtttcgtgtgatttgccactattt
tcgactttcggcggacaggatgttgatcggcttccttcagcttctacttgctacaacacc
ctcaagcttccaacatacaaacgccagagtactttgagagcaaagcttctatatgctatc
aattccaatgctggtttcgaactttcatag
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