Lycium barbarum (goji berry): 132629882
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Entry
132629882 CDS
T09483
Name
(RefSeq) double-strand break repair protein MRE11 isoform X1
KO
K10865
double-strand break repair protein MRE11
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03440
Homologous recombination
lbb03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132629882
03450 Non-homologous end-joining
132629882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbb03032
]
132629882
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132629882
DNA replication proteins [BR:
lbb03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
132629882
DNA repair and recombination proteins [BR:
lbb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
132629882
BRCA1-C complex
132629882
NHEJ (non-homologous end-joining)
MRX complex
132629882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
Motif
Other DBs
NCBI-GeneID:
132629882
NCBI-ProteinID:
XP_060201271
LinkDB
All DBs
Position
3:1939455..1954020
Genome browser
AA seq
733 aa
AA seq
DB search
MDDSSRDEASDTIRILVATDCHLGYMEKDEVRRHDSFQAFEEICSIAEKKQVDFVLLGGD
LFHENKPSRSTLVKAIEILRRYCLNDRPVQFQVVSDQTVNFANLFGHVNYEDPHFNVGLP
VFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMDLGGSGVGEIALYPILMRKGLTTIA
LYGLGNIRDERLNRMFQTPHAVQWMRPEAQEGCQVSDWFNILVLHQNRVKANPKNAINEH
FLPRFLDFIVWGHEHECLVDPQEVPGMGFHITQPGSSVATSLIEGESKQKHVLLLEIKGN
QYRPTKIPLNSVRPFEYTEVVLKDEPDIDPNDQSSILEHLDKVVRKLIERSSQKANNGSA
VKLPLVRVKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKSSKRVGKEAKFDDSERLR
PEELNQQNIEALVAESNLKMEVLPVSDLDVALHNFVNKDDKMAFHSCIKYNLEETRNKIA
RDSDDVKFEEDDIILKVGECLEERVKQRAARNKDDQPFSFSGQSLEDIRGKSTGVGSAVS
FSDDEDATMPSASKSTAGKGRKESSQSFRSSRDTSEVGKTSSRGRGRGRGRGRASNSLKQ
TTLDASLGFRQSQRSASIAASASVRSIAEDDENVESPSSDEDAKQDTNAIDESSDDDKTV
QGKGRKRAAPRGRGRASATAAKRGKRSDSSSSSLQRMLMDADEDDDDDDDMAKKETRPRP
RPRVTRNYGSLRR
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggacgattcttcaagggatgaggcgagtgacaccattaggatcctggttgctacagat
tgtcatttgggctatatggagaaggatgaagtacgtaggcatgattcatttcaggcattt
gaagagatatgttcaatcgcggagaaaaagcaggtggactttgtgcttctcggtggtgat
ctatttcacgagaataagccatccaggtcaacactggtgaaagccattgagattcttcgc
cgttattgtctcaatgatcgaccagtgcaattccaagttgttagtgaccagacagtgaac
tttgctaacctatttggtcatgtaaattatgaagatcctcactttaatgtggggttgcct
gttttcagcattcatggcaatcatgacgatccagctggtgtggacaacctatctgccgtt
gatatcctttccgcatgcaatcttgttaactattttggtaaaatggatcttggtggttct
ggtgttggggagattgctctctaccctattcttatgaggaagggtttaacaacaatagct
ctttatggtcttgggaatatcagagatgaacggttgaatagaatgtttcaaacaccacat
gccgttcaatggatgcgacctgaggctcaggaagggtgtcaagtgtcagactggttcaac
attttggtacttcaccaaaacagagtaaaggcaaatccaaaaaatgcaataaatgagcat
ttcctgcctcggtttctggattttattgtatggggtcacgaacatgaatgtttggtggat
cctcaggaggttccaggtatgggttttcacattactcagccaggttcttctgttgcgaca
tcacttattgagggtgaatcaaagcaaaaacatgtactcctattagaaattaagggaaat
caatatcgtccaacaaagatacctctgaactcagtgcgtccttttgaatatactgaggtt
gtgctgaaggatgaacctgatattgatcctaacgatcagagttcgattcttgaacatttg
gataaagtagtcagaaagctgatagaaagatctagtcaaaaggctaataatggatctgct
gtaaagctacccttagttcgagtaaaggtagactactctgggtttatgactataaatcct
caaaggtttggacaaaaatatgtgggaaaggttgccaatccacaggatattctcatattc
tcaaaatcttcaaaaagggttggcaaggaagctaaatttgacgattctgagcggcttcgc
cctgaagaattgaatcagcaaaacattgaagctttagttgctgagagcaatttgaaaatg
gaggtacttccagtcagcgatctggatgttgcgctgcacaattttgtaaacaaggatgac
aaaatggcttttcattcttgtataaaatacaaccttgaggaaactcgaaacaaaatagct
cgtgattcagatgacgtgaagtttgaagaagatgatataattttaaaagttggagagtgc
ttagaggaacgtgtcaaacaaagagctgcacgaaataaagatgatcaacctttctccttt
agtggacagtctttggaggatattagaggcaaaagtactggagtaggatcagcagtttca
tttagtgatgatgaggatgccactatgccctccgcctcaaagtctactgccggaaaagga
aggaaagagtcatctcaatcttttagatcctctcgtgatacttctgaagttggcaagacc
tcttcaaggggaaggggtagaggtagaggcagaggaagggcttccaatagcttgaagcag
acaacccttgatgcatctctgggattccgtcagtcacagaggtctgcatcaattgctgca
tctgcgtcagtgcgaagtattgccgaagatgatgagaatgtggaatctccttcaagtgat
gaagatgccaagcaggacactaatgctattgacgaaagctcagatgatgataagacagtc
caggggaaaggacgcaaaagggctgctccaaggggaaggggcagagcttcagcaacagcg
gctaaaaggggaaaaagatcagatagctcctcatcttcacttcaaaggatgctcatggat
gcagatgaagatgatgatgatgatgatgacatggcaaagaaagaaactagacctcgacct
cgacctcgggtaactaggaattacggttctttaaggagatga
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