Lycium barbarum (goji berry): 132629922
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Entry
132629922 CDS
T09483
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00900
Terpenoid backbone biosynthesis
lbb01100
Metabolic pathways
lbb01110
Biosynthesis of secondary metabolites
Module
lbb_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
132629922
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lbb01006
]
132629922
Enzymes [BR:
lbb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
132629922
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
132629922
2.5.1.29 geranylgeranyl diphosphate synthase
132629922
Prenyltransferases [BR:
lbb01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
132629922
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
132629922
NCBI-ProteinID:
XP_060201327
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All DBs
Position
3:2863090..2869879
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AA seq
334 aa
AA seq
DB search
MVFSMVMSCSPHLCLPRSRMVMQKTIRCSSSVSTASESVQFDLKTYWSTLIRDINQKLDE
AVPVKYPNQIYEAMRYSVLAKGAKRSPPIMCVAACELFGGNRLAAFPTACALEMVHAASL
IHDDLPCMDDDPTRRGLPANHTVFGVDMAILAGDALFPLGFQHIVSHTPTNLVPEDRVLK
VITEIARAVGSTGMAAGQFLDLEGGPNAVDFVQEKKYGEMGACSAVCGGLLAGASDEEIQ
HLRRYGQAVGMLYRVVDDVLEAKETKETTEGKKKKGKSYVSAYGVEKAMKVAEDLRASAK
RELDGLEKYGDKVMPLYSFVDYAADRGFSIDDQV
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggtattctctatggtgatgagttgttcacctcatttatgtcttccaaggagccgcatg
gttatgcagaaaacaatccggtgctcttcttctgtttcaacagcatctgagtccgtccag
tttgatcttaagacttattggtcaactctaattcgtgatatcaaccagaagcttgatgag
gcggttccggttaagtacccaaatcagatttatgaggccatgcgctactctgttctggcc
aagggtgccaaaaggtccccacccatcatgtgtgtcgcggcctgtgagcttttcggtgga
aatcgcctagctgcctttcccactgcctgtgccctagagatggttcatgctgcttcgttg
attcatgatgatttgccctgcatggatgacgacccaactcgacgaggccttcctgcaaac
cacacagtttttggtgtagatatggcaattttagccggggatgccttgttccctcttggt
tttcagcatattgtgtctcacactccaaccaatctcgttcccgaggatcgagtcctcaag
gtcattacggagattgctcgagctgtgggatccactggtatggctgctggtcagttcctt
gaccttgaaggtggaccaaatgctgttgatttcgttcaagaaaaaaaatacggtgaaatg
ggcgcgtgctctgccgtttgtggaggtctcttggctggtgcttcggatgaggaaatccaa
catctgagaagatatggtcaagctgttggtatgttatatcgggttgttgacgatgtattg
gaagcaaaggagaccaaggaaacaaccgaggggaagaaaaagaaaggcaaaagttatgtc
agcgcttatggcgttgagaaggctatgaaagttgccgaggatcttagggcatcggctaag
agagagttagatggtctggagaagtacggcgataaagtcatgccgctttatagttttgta
gattatgctgcagatagaggttttagtattgacgaccaagtctag
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