Lycium barbarum (goji berry): 132629991
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Entry
132629991 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132629991
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132629991
Enzymes [BR:
lbb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132629991
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132629991
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
zf-RING_11
zf-C3HC4_4
zf-RING_Vps41
zf_RING_Vps8
RIMB1_N
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
132629991
NCBI-ProteinID:
XP_060201455
LinkDB
All DBs
Position
3:4860410..4872607
Genome browser
AA seq
625 aa
AA seq
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MDFSSDDSQLNDDILLLPDEAAAAAEYEVEEEEEDESEEEEDEEEEEDEEDEEESGRTTL
RRVLYGNRSGVSTSSSREQAIRHENLAVDSGDAAMRRTKGGETASQDVDEEGGGSEGGGE
WNRSEIDGLFCSICMEAWTNEGDHQICCLPCGHIYGLSCIKKWLQQKGSSGKCPQCNKKC
TVKGIRVLYASRLHAVDEELQKKFRSLEARCFSLEKECTDWCKKEIEWRRREAELHKQVE
HLKERTTEGSPSEMQNRSSGSIFGRNNVSKSARREYVNGFAFQKEFQIDGARLFDVDSNG
ENLMIARRLSGMGGQHMLTKISLLPPHEREDILLPLSMKTIKDLHVSPRERLILLASLGK
KLSVLSAENNHIVLTYDLPAVPWSCSWDLNMSHSMYAGLQNGMVLQFDRRQTTVPVESLT
GLTGNPVHTLCSLFADPTLGAGIRSVLSASSVGLCHWNFGSGNERPCLVPESENQGICIS
LAYGDRNDDVVASFRPKLESSGDMAASQVLPTPVSTMEQAVDGSHVLYRRMGTRYQKLGS
SCAKVNGIRLPKSAIIDRGKNPMFASGDESTMELVLQDLPSLNVAQRIKSLDGPIRDVRY
ARLRNSGWLGCLSEDTLQLYSTKLQ
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggatttcagtagtgatgattctcaattaaacgacgacatccttctcttaccagacgaa
gcagcagcagcagcagagtacgaggtagaagaagaagaagaagatgaatccgaagaagaa
gaggatgaagaagaagaagaagacgaagaggatgaagaagaatcgggaaggacaacgttg
cgtagggttttatacggaaatcgtagcggtgtttcaacgagttcatctcgagagcaagcg
attagacacgagaatttggctgtggatagtggagatgctgctatgaggaggacgaaagga
ggggaaacagcgtcgcaagatgttgatgaggaaggagggggaagtgaaggaggaggagag
tggaatcgaagtgagattgatggtttgttttgctctatttgtatggaagcttggactaac
gaaggcgaccaccaaatctgctgtcttccttgtgggcatatatatggtttgtcatgtatc
aaaaagtggttgcaacaaaaaggaagttcaggaaagtgccctcaatgtaataagaaatgc
acagtgaagggtatccgagtactttatgcttctcgacttcatgctgtcgatgaagagctt
caaaagaaattccggtctcttgaagctagatgtttttctcttgaaaaagagtgtacagac
tggtgtaagaaagaaattgagtggaggaggagagaagctgagttgcataagcaagtggag
cacctcaaagagagaacaactgagggctcgccaagtgagatgcaaaacaggtcatctgga
agcatttttggacgcaataatgtctccaaatctgcaagacgtgaatatgtgaatggtttt
gcttttcagaaagagtttcagattgatggtgctcgcctatttgatgtggacagcaatggt
gagaatttgatgattgccagaaggctgtctggaatgggaggacagcatatgcttaccaaa
atcagtctgttacctccgcatgaaagagaagacattctgcttcctctgagcatgaaaact
atcaaggacttgcatgtttctcctcgtgaaagactcatactcttggcttctttaggaaag
aagttgtcagttcttagtgctgaaaacaaccatattgttctgacatacgacttaccggct
gttccttggtcatgttcgtgggatctcaacatgtcgcatagcatgtatgctggattacag
aatggcatggttttgcagtttgatcggcgtcaaactactgttccagtggaatctttgact
gggttaactggaaatcctgttcatactctgtgttccctttttgctgatcctacacttggt
gccggtattagaagtgttctttctgcatcttcagtaggcttgtgccactggaactttggt
agcggtaacgaaaggccgtgcttggtccctgagtcggagaatcaaggaatctgtatatct
ctcgcttatggagatagaaatgatgatgtagttgcctctttccgtcctaaactggagagc
tctggtgacatggctgcttctcaagtattgcctactccagtttctacaatggagcaagca
gtagacggttctcatgttctttacaggagaatgggtaccagataccagaagttaggatcg
tcttgtgccaaagtgaatggcatccgacttccaaaatctgctataattgatagagggaag
aaccccatgtttgcttctggtgatgaatcaacaatggaactggtcttacaagatttgcca
tctttaaatgtggctcagcgcattaaatctctcgacggacctattcgtgacgtgaggtat
gcacgcctccgaaattcaggatggctcggttgtttgagtgaggatacattgcagctttac
tcaactaagctccaatga
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