Lycium barbarum (goji berry): 132630076
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Entry
132630076 CDS
T09483
Name
(RefSeq) valine--tRNA ligase, mitochondrial 1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132630076
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lbb01007
]
132630076
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbb03016
]
132630076
Enzymes [BR:
lbb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
132630076
Amino acid related enzymes [BR:
lbb01007
]
Aminoacyl-tRNA synthetase
Class I (U)
132630076
Transfer RNA biogenesis [BR:
lbb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
132630076
Prokaryotic type
132630076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Val_tRNA-synt_C
Motif
Other DBs
NCBI-GeneID:
132630076
NCBI-ProteinID:
XP_060201581
LinkDB
All DBs
Position
3:complement(6951848..6963887)
Genome browser
AA seq
1077 aa
AA seq
DB search
MAESESKSHETVKNCKPEAATAAEGKQLTPEELEKKKKKEEKAREKELKKLKAAQKAEAA
KQAQASSNVSKTAKKKSSKKDGGEDNPEDFVDPETPLGEKKRLSREMAKTFNPSAVEKSW
YSWWEKSNFFVADPNSSKPPFVIVLPPPNVTGALHIGHALTAAIEDTIIRWRRMSGYNTS
WVPGMDHAGIATQVVVEKKIMRERNLSRHDIGRENFVAEVWNWKNEYGGTILQQLRRLGA
SLDWSRECFTMDEKRSKAVTEAFVRLSNEGLIYRAPRMVHWDCVLRTAISDIEVDYTDIK
ERTLLNVPGYEEPVEFGLLTSFAYPLEGGLGEIVVATTRIETMLGDTAIAIHPEDKRYSH
LHGKFAIHPFNGRKLPIVCDEILVDMNFGTGAVKITPAHDPNDFEVGQRHKLEFISIFTD
DGNINSNAGSAFEGMPRFKARVAVTEALKEKGLYRGAKNNEMRLGICSRSNDVVEPLIKP
QWFVNCQIMAKQALDAVMDDENRKLEIIPKQYSAEWKRWLENIRDWCISRQLWWGHRIPA
WYVTLRDDKQKEFGVCDDHWIVARNEEEARDLAHRKFSGKEIVELSQDPDVLDTWFSSGL
FPLSVLGWPDDTPDFKTFYPTSVLETGHDILFFWVARMVMLGIKLGGDVPFSKVYLHPMI
RDAHGRKMSKSLGNVVDPLEVINGITLNGLHKRLKEGNLDAKEFERAKEGQAKDFPNGIP
ECGADALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAIRFAMSKLGEDYTPPTKIV
PHEMPFSCQWILSALNKAIGKTVSSLEAYDFSDAATTVYSWWQFQLCDVFIEVIKPYFAG
DNPQFVSARRFAQDTLWLCLDNGLRLLHPFMPFVTEELWQRLPASGNSIKKESIVISDYP
STIESWNNDIVEAEMEKVSSIVKGLRSKRALLPPKERFARREAFVLCRTKDTVEIIKSRE
LEISTLATLSSLKVSSDSDAAPTQWLTEVVDESVTVFLEEKGSISNPEAEVERLKKKKEE
TRKQYQSLTKIMSASGYKEKVPANVHEENTSKLGVLKQELESFEENIERLIRQMEAL
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtcggagagtaaatcacacgagacagtgaaaaattgcaaaccggaggcggcg
acagcagcagagggaaagcaattaacacctgaagagctcgaaaagaaaaagaaaaaggaa
gaaaaggctagagagaaagagttgaaaaaactcaaagctgcacaaaaggcggaagcagca
aaacaggcacaagccagctccaatgtgtcaaagactgccaagaagaagagctcaaaaaag
gatggcggagaagataatcctgaggattttgttgatccggaaacacctctgggggagaag
aagaggctctcccgtgaaatggcaaagacttttaatcccagtgctgtagagaaatcgtgg
tattcgtggtgggagaagtccaatttctttgttgcagacccaaacagctctaaaccacct
tttgtgattgtcttgcccccaccaaatgtaactggtgctctccatataggacatgcactc
actgctgccatcgaggatactattattcgttggcggagaatgtctggatacaatacctcg
tgggtccccgggatggatcatgctgggattgcaacacaggttgttgtggagaagaagatc
atgcgagagaggaatttgtctagacatgatattggtcgggagaactttgtagctgaagtc
tggaattggaagaatgagtatgggggtactatactgcagcaattacgccgcctgggtgca
tcacttgattggtcccgtgagtgctttaccatggatgagaagaggtctaaggctgttact
gaagcatttgttaggctttccaatgaaggtcttatatacagggctccacgtatggtgcac
tgggattgtgtcttgcgtactgcaatatctgatattgaggttgactatacagacatcaaa
gagaggactctactgaatgttcccggatatgaagagcctgtggagtttgggctgctgaca
tcatttgcttaccccttagaaggtggtcttggtgaaattgttgtggcaaccaccagaatt
gaaactatgcttggtgatactgcaattgctatacatcctgaagacaaaagatacagtcat
cttcatgggaaatttgctattcatccattcaatgggagaaagcttccaatagtttgtgat
gaaatacttgtagatatgaactttgggactggtgctgttaagataactccagcccatgat
ccaaatgattttgaggttggacagcgtcacaagcttgaattcataagtatttttactgat
gatgggaatataaatagcaatgcaggttcagcctttgaagggatgcctcgtttcaaagct
cgtgtcgctgtgacagaagctttaaaagaaaaaggtctctacaggggtgctaagaataat
gagatgcgccttgggatttgttcaagaagcaatgatgtcgtggaaccgctgataaagccc
caatggtttgtcaactgccaaattatggccaagcaggctttggatgctgttatggatgat
gaaaatcggaaactggagatcatcccaaagcaatattctgcagaatggaaaagatggctt
gagaatattcgtgattggtgcatctcgaggcaactttggtggggtcatcgcattcctgct
tggtatgtgacacttcgtgatgataagcagaaggaatttggtgtctgtgatgatcattgg
attgttgctagaaatgaagaagaagctcgagatttggctcataggaaattttcggggaag
gagattgttgagctctctcaggatccagatgtgctagatacctggttttcgtctggtctt
tttccgttatctgtattggggtggccagatgatactccagatttcaaaacattttatcca
acttcagttcttgaaactggacatgatattctcttcttctgggttgcacgtatggtgatg
ttgggaataaagcttggaggtgatgtaccattttcaaaggtttatttgcatccaatgatc
cgcgatgctcatgggcgtaagatgtccaagtcgttgggaaatgttgttgaccctcttgaa
gttattaatgggattacccttaatggtcttcataagagattaaaggagggtaacctggac
gccaaagaatttgagagggcaaaagagggacaggcaaaggacttccctaatggcattcct
gaatgcggtgcagatgctcttcgatttgcccttgtctcatacactgcccagtccgataag
atcaatcttgatatccagagagtggttgggtatcgtcaatggtgtaacaaactgtggaat
gccattaggtttgccatgagtaaactgggtgaagattacacccctccaacaaagatagtt
cctcatgaaatgccttttagctgccagtggatactctcagcacttaacaaggccataggg
aaaactgtctcatccctggaagcttatgatttctccgatgcagcaacaacggtatattcg
tggtggcagtttcagttgtgtgatgtgtttatagaagtaatcaagccatactttgctggt
gataatccacaatttgtatctgcaagaagatttgctcaagacacgttgtggctttgttta
gataacgggttgagattactccatccatttatgccatttgttactgaagaactgtggcag
cgccttcctgctagtgggaattctataaagaaagaatctatagtgataagtgattatcct
tcaactatagagagctggaataatgatatagtggaagctgagatggaaaaggtgtcatcc
attgttaaaggccttaggtcaaagagggcattgttgcctccaaaggagagatttgcaagg
cgagaagcatttgtgctttgccggacaaaagatactgtggagatcattaaaagccgcgaa
cttgagatatctactctagctacactgtcatctctgaaggtctcaagtgacagtgatgca
gctcccactcaatggctgacagaagttgtggatgaatctgtcactgtttttcttgaggaa
aaagggtctatcagtaacccagaggctgaagttgaaaggctcaaaaagaaaaaagaagag
acgaggaagcaatatcaaagcttaaccaaaatcatgagtgcctctggctacaaagagaaa
gttccggctaatgtccatgaagaaaatacatcgaaacttggtgtcctcaagcaagaactg
gaatcattcgaagaaaatattgagcgtctcatacgtcaaatggaagcactataa
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