Lycium barbarum (goji berry): 132630103
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Entry
132630103 CDS
T09483
Name
(RefSeq) probable DNA helicase MCM8
KO
K10737
DNA helicase MCM8 [EC:
5.6.2.4
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbb03032
]
132630103
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132630103
Enzymes [BR:
lbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
132630103
DNA replication proteins [BR:
lbb03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
132630103
DNA repair and recombination proteins [BR:
lbb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
132630103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
WHD_MCM8
MCM_OB
MCM_lid
Mg_chelatase
AAA_5
AAA_3
Sigma54_activat
AAA_16
AAA
FtsK_SpoIIIE
AAA_29
Motif
Other DBs
NCBI-GeneID:
132630103
NCBI-ProteinID:
XP_060201627
LinkDB
All DBs
Position
3:7530127..7542852
Genome browser
AA seq
794 aa
AA seq
DB search
MSGEMVMNNGKILQQRLANPTICLAKTLSIYFPGIDFHVGDPQFRLSSELVRFFSSPSGQ
YFVSQVKEVDGTFILPLDFQQFRKICELQEFYAILESKSKDALLCMSAALHKVFFMKLGD
ESFDDFSKINIRLHNYPQSMIALKNLKAAYIDRLVSVRGTVVKVSTVKPLVMQMSFACTK
CGTSITRDFPDGKFSPPPVCELHGCKCRTFNPIRSTARIIDFQKIRIQELLKSEHHEEGR
VPRTVECELTEDLVDACIPGDIVTVTGIIRVINNYMDIGGGKSKGKNQGLYYLYLEVVSI
TNSKSQSTSEGSQDNSNARATELFDLYSFSPKDLEFIVKFSEEHGSDVYRQILQSICPSI
YGHELVKAGITLALFGGVRKHSMDQNKVPVRGDIHVIIVGDPGLGKSQLLQAAASISPRG
IYICGNATTNAGLTVAVVKDPLTGDYAFEAGAMVLADRGLCCIDEFDKMSAERQALLEAM
EQQCVSVAKAGLVASLSARTTVLAAANPVGGHYNRAKTVNENLKMSGALLSRFDLVFILL
DKPDEVLDKRLSEHIMSLHAKSVEQPPVAKRLCTASLDVREIDMNTKQGSLIARLRLDPK
KDSGFVPLPGPLLRKYIAYARTYISPRMTKPAAEILQKFYLKLRDHNTSGDGTPITARQL
ESLVRLAEARARVDLREEITEQDALDVVEIMKESLYDKYVDEHGFVDFGRSGGMSQQKEA
KRFLSALHNQSELQQKDCFSISEIYSLADRIGLRVPDIDTFVDNLNSVGYLLKKGPKTYQ
VLSSSYSQTSRSRG
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgagtggagaaatggtgatgaacaatgggaagattcttcaacagcgattagcaaaccct
actatatgtctcgctaaaacattgtctatatatttccctggtatcgatttccatgttggt
gatccccaatttcgtctctcttctgaacttgttcgcttcttctcttctccttccggtcaa
tatttcgtttctcaggtgaaggaagttgatggcacgttcatattgccactggactttcag
caattccggaaaatttgtgagctccaagagttttatgcaattttggagagtaaatctaaa
gatgctctattgtgtatgagtgctgcattacacaaggttttctttatgaaattgggggat
gagagttttgatgatttttcgaagataaatatccgtctccacaactatcctcaatcaatg
attgcattgaagaacctaaaagctgcttacattgataggcttgtctctgtacgcggtaca
gtggtaaaagtcagcacagtgaagccactggtaatgcaaatgagttttgcctgtactaag
tgcggaaccagtattactcgtgacttcccagatggaaaattttcacctccaccagtatgt
gaattgcatggttgcaaatgcaggacttttaatcccataaggtctacagctcgaattata
gactttcagaaaataagaattcaagagttgctgaaatctgaacatcatgaagaagggcgg
gtacctcgaactgttgaatgtgaactaactgaagatcttgtagatgcatgcatccctgga
gatattgtgactgtcactggtattattagggtgattaacaattacatggatattggagga
ggaaagtcaaaaggcaagaatcaaggactttactatttatatctagaagtagtttctatt
acaaactcaaagtctcagtcaacatctgagggttcacaagataattctaatgctagagct
acagagctatttgatttatactcattctctccaaaggatttggagtttatcgttaagttt
tctgaagagcacggttctgatgtttaccgacaaatacttcaatctatttgcccctcgatc
tatggtcacgagcttgttaaagcgggaattacattagctttatttggtggtgtgcggaag
cattccatggatcagaataaggttcctgtgagaggagatatccacgtaataattgtcggt
gatccgggattgggtaaaagtcagctacttcaagcggcagcttccatttctcctcgtggc
atatatatttgtggtaatgcaacaaccaatgctggccttactgttgctgttgtcaaggat
cctttgaccggtgactatgcgtttgaagcaggtgctatggttcttgcagatcgtggatta
tgttgcattgatgagtttgacaaaatgtctgccgaacgtcaggccctattggaggctatg
gaacaacagtgcgtctctgttgcaaaggcaggacttgttgcaagtttgtcagcgcgaaca
actgttttagcagcagcaaaccctgttggtggccactacaaccgtgcaaaaactgtgaat
gagaacttgaagatgagtggggctttgctttcacgatttgatttggttttcatattactt
gataaacctgatgaagtgctggacaagcgactctctgagcacattatgtcacttcatgca
aaaagtgtagagcagccaccagtcgcgaaacggttatgtacagcctcgctggatgttaga
gaaattgacatgaatacaaagcagggttctttaattgcaaggctgagacttgaccctaag
aaagacagtggttttgttccattgcctggccctcttctgcgcaaatacattgcttatgca
agaacttatatatctcccaggatgacaaaaccagcggcagaaatcttgcagaaattttac
ttgaagttgagggatcataatacgtccggtgatggtacaccgataacagcaaggcaatta
gagagcttggtaaggttggcagaagctcgagctagagtggatctaagagaagagataact
gagcaagatgctctggatgttgtggaaataatgaaagaatcattatatgataagtacgtt
gatgagcatggatttgtggattttggacggagtgggggaatgagtcagcagaaagaagca
aagcggtttttgagtgccttgcataatcagtcagaattgcagcaaaaggattgtttttca
atttccgaaatatatagtctggcagatcggattgggttaagggttccagatattgacaca
ttcgtggataatcttaatagtgttggttatttactaaagaagggtcccaagacatatcag
gtgctatcatcatcttattcacaaacatcaaggtcaagaggatag
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