Lycium barbarum (goji berry): 132630171
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Entry
132630171 CDS
T09483
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00040
Pentose and glucuronate interconversions
lbb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
132630171
Enzymes [BR:
lbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
132630171
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
132630171
NCBI-ProteinID:
XP_060201733
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Position
3:8815522..8822861
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AA seq
370 aa
AA seq
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MGNHHGRYSHHRKHHQQQGPPFPGPPYMYGPSGHSATQQTKNTEMGLNLPYVNVDSTLRG
LAGQAEGFGGSSIGGRDGHVYQVVNLNDDGPGSLRDGCRKKEPLWIIFEVSGTIELRSYL
AVSSFKTIDGRGQKIKLTGKGLRLKECEHVIICNLEFEGGRGPDVDGIQIKPKSRHIWID
RCSLSDYDDGLIDITRESTDITVSRCHFSKHDKTMLIGADPSNCGDRCIRVTIHHCFFDG
TRQRHPRVRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKVAFKYLTEKAA
DKEEACTGSIKSEDDLFVCGTQAGLLSTYSENNIFNPFEFYQTWTVERPSDDLKHYLQHC
TGWQCIPRPN
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggggaaccaccatggccgttactctcatcacagaaaacaccatcaacaacaaggcccc
ccatttccaggtccaccttatatgtatggtccatccggtcattctgcaacacagcaaacc
aagaatacagagatgggtttgaatttaccttatgttaatgttgactctaccttgcgtggt
cttgctggtcaagctgagggatttggtggttcctctattggtggacgtgatggtcatgtt
tatcaagttgttaatctcaatgatgatgggccaggatcacttcgagatggatgtcgtaaa
aaagaacctctatggatcatctttgaagtttcagggaccattgagctccgttcttatttg
gctgtgtcgtctttcaaaactattgatgggcgaggccaaaaaataaaactcacagggaaa
ggtttaaggttgaaagaatgtgaacatgtgatcatctgcaatctagagttcgagggaggc
agaggacctgatgttgatggcattcagattaaaccaaagtcgaggcatatttggatagat
cgttgcagccttagcgactatgacgatggtttaattgacatcacaagagagagcacagat
attactgtttctaggtgtcacttttcaaagcacgataaaacaatgcttattggagcagat
ccttctaattgtggtgatagatgtataagggtcaccattcaccattgtttttttgatgga
actagacagcggcatcctcgtgttaggtttggcaaagtacatttgtacaataactacacc
aggaactggggaatttatgctgtttgcgcaagtgtagaatcacagatatattcccaatgc
aacatatatgaagctggacaaaaaaaggtggcctttaaatatctcacagagaaggcagct
gacaaggaggaagcatgtactggtagcattaaatctgaagatgacttgtttgtttgtgga
actcaggctggtttgttgtctacttacagcgaaaacaacatcttcaatccattcgaattc
taccaaacctggactgttgaacgaccgagtgatgatctcaaacactaccttcaacattgt
acagggtggcaatgtatcccacggccaaattga
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