Lycium barbarum (goji berry): 132630368
Help
Entry
132630368 CDS
T09483
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial isoform X1
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbb03016
]
132630368
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
132630368
Transfer RNA biogenesis [BR:
lbb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
132630368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-GeneID:
132630368
NCBI-ProteinID:
XP_060201934
LinkDB
All DBs
Position
3:complement(11874154..11894739)
Genome browser
AA seq
785 aa
AA seq
DB search
MAVRAMNTCVIFRSAATPPLVISRRLTTASSKHRNRSNSFLRYPLISHVAIRSYSVHNLV
EMVMEELASIRKRGGRVRATTKLELASTGELLEDKLKKGTLQKGLLLEFKKDSERLLLAV
ALKPDGKKNWMVSDQNGITTSIKPQQVTFIVPGVENFEPTEVSEFVQKAHDNLDPALLEF
AWNELVEKNKSVTAQELAEMIFGSAEPLETYCAHLLLSRDEVYFSVLESKGLSVYGPRSA
TQVDEFLRRKLAKQAAEKEFAELIQLLRSAKQMPLQDKPPRSSWKTEERTWRRIESLEAF
AIDFCKNEDQTKTAGMILKAMGLAKTSSAAMNLLIDIGYFPVHVNLDLLKLNLPTDHRDE
ILLAAESLLSAATDLDEADRIDLTHLKVYAIDVDEADELDDALSATRLQDGRIKIWIHIA
DPTSLVQPGSIIDKDARRRGTSIFLPSATYPMFPERLAMEGMSLKQGKLCNAVTVSVVLR
SDGSIAEYSVENSIIKPTYMLTYESATELLHLNLEEEIELKILSEAAALRLRWRREQGAI
DTATLDNRIKVTNPDHPEPSIKLYVENQADAAMRLVTEMMILCGEVIATFGSHNNIPLPY
RGQPQSNIDMSAFAHLPEGPVRSAAIVRTLRGAEVNFRNPIRHGVLGLPGYVQFTSPIRR
YMDLAAHYQVKAFLSGDSPPFSAGELEGIASTVNMTTRVVKRLSSSSLRYWTLEYLRRQP
KGKRYRALVLRFVKDREAAILLTEIGVHASSRVSNGVQIGDEVHVQVEEAHPRDDVLTLK
EVEAV
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcgcgccatgaacacctgcgttattttccgttccgccgcaacgccgccgtta
gtcatctctcgccgattaaccaccgcctcttctaaacaccgaaaccgttcgaattcattt
cttcgttatcctctcatcagccacgtggcaattcggagctattcagttcacaacctagtc
gaaatggtcatggaagaacttgcttctatacgtaaacgtggcggaagagttcgtgctact
accaagctggaattagctagcacaggagagctgcttgaggataagttgaaaaaagggaca
ctacaaaaaggattattgctggagtttaagaaggattctgaaaggttgttgctagcagtt
gctcttaaacctgatggaaaaaagaattggatggtctccgatcagaatgggattacaacc
tccattaagccacaacaagtaacttttattgttcctggtgttgaaaactttgagcccaca
gaagtatcagaatttgtgcagaaagctcatgataacttggatccagcactgcttgaattt
gcgtggaatgagcttgtcgagaaaaataaatcagtaacagctcaggaactagctgagatg
atttttggtagtgcggagcctcttgagacctattgcgcccacctgctattatcaagagat
gaggtgtacttttcagttctggagtcgaaaggtctttctgtatatggacctcggagtgct
acccaggtggatgaatttttgcgaaggaagcttgctaaacaggcagctgagaaggagttt
gcggaacttatacagttattgcgatctgctaaacaaatgcctcttcaggacaaacctcca
agatcgtcctggaagactgaagagagaacttggcgcaggatagaatctcttgaagctttt
gccattgatttttgcaaaaacgaagatcaaacgaaaacagctgggatgattttgaaggcc
atgggactggcgaagacttcatctgcagcaatgaatctcctcatagatattgggtatttt
cctgtacatgtgaatcttgatttgttgaagttaaacctccctactgatcatcgagatgag
attctgttggctgcagagagtcttttatctgcagcaacagaccttgatgaggctgataga
atagacctgactcacctgaaggtttacgcgattgatgttgatgaggctgatgagcttgat
gacgcattgagtgcaacaaggctgcaggacggacggattaaaatctggatacatattgca
gatcctactagtttagttcagccaggaagcataatagacaaagacgcaagaagaagagga
acttcaatatttttgcctagtgcaacatatccaatgtttcctgaaaggttggccatggaa
ggcatgagtctgaagcaaggaaagctgtgtaatgctgttactgtttccgttgtgctgcgg
tccgatggaagcattgcagaatactcggtggaaaactcaatcatcaaaccaacatatatg
ttgacatatgagagtgcaacagagctccttcatttgaatctggaagaagagattgaattg
aaaattctgtctgaagcagctgcactccggttaagatggcgtcgagaacagggtgctata
gacacggccaccttagataaccgaattaaggtgactaatccagatcatccagagccatca
atcaagctgtatgttgaaaaccaggctgatgccgctatgaggcttgttactgagatgatg
atactctgtggggaagttatagccacttttggttcgcataacaacatccctttaccatac
cgaggacagcctcaatctaatatcgacatgtctgcatttgcacaccttccagaaggaccc
gtcaggagtgctgctattgttcgaactttgcgtggcgctgaagtgaatttcaggaatcct
atacgccatggggtgttgggacttccaggctatgttcagtttacctcccctattcgaaga
tatatggatctcgcagcccattaccaggtaaaagcctttcttagtggagattctcctccc
ttctcagctggcgagctggaaggcattgcgtctacagtaaacatgacaaccagagttgta
aagaggctctccagcagcagtcttcgttattggacattggaatacttgagaaggcaaccg
aaaggaaaacggtatcgtgccctggtccttagattcgtcaaagaccgagaagccgcaata
ctgttgacggagattggagttcatgcttcttcacgggtgtctaatggtgtacaaattggt
gatgaagtacatgtgcaagttgaagaagctcatccacgtgatgatgttctcactcttaag
gaggttgaggcggtatag
DBGET
integrated database retrieval system
