Lycium barbarum (goji berry): 132630658
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Entry
132630658 CDS
T09483
Name
(RefSeq) E3 ubiquitin-protein ligase HAKAI homolog
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132630658
04131 Membrane trafficking [BR:
lbb04131
]
132630658
04121 Ubiquitin system [BR:
lbb04121
]
132630658
Enzymes [BR:
lbb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132630658
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
132630658
Membrane trafficking [BR:
lbb04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
132630658
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132630658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
YlxR
Motif
Other DBs
NCBI-GeneID:
132630658
NCBI-ProteinID:
XP_060202198
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All DBs
Position
3:19496468..19504140
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AA seq
477 aa
AA seq
DB search
MLQIRLSKPASENGGGAKSLPPDTVTVACPDHLVLADLPVAKSLGSVNAASLLKTVGRRS
RRQLGERVHFCVRCDFPIAIYGRLSPCDHAFCLDCSRSDSLCYLCDERIQKIQTIKLMEG
IYICAAPHCLKSFLKKSEFESHIHENHSDLLHQTAEKDGNASESACARKPAASESTVQAP
PRPLFSPSSGSQVHDREDKAHHSQTRDQQPPRPVMQPKPPPFTGSIQNHQLEQSDSNPPP
GFERPGMQNRLPQQGFDTQVHFPDKKQGIMGGSPFPEYPMQMPQPHGFAVPMNSNPGLAP
QFGYNQFAPDGAQPFYSAASTPEMGGSEQGSLLGFPPGAAGNMNFPENYPRQWNMGPAAV
QPPPDGFVSGTDPQGRAVFFQGDYGRNNGVMPSNLPPPPSTNRGMEGGLSSNSMDTRDNN
KGILMPPQPMSLPPPPPLPHHMSQHQRGGRHYLGDGHDGQGYGWQHEKRDSFGSNQD
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagatccggcttagcaagccagccagtgagaatggcggaggcgctaagtctttg
cctcctgacactgttacagttgcttgtcctgatcaccttgttttagctgatcttcctgta
gccaagagccttggttcagtaaatgctgcatctttgctcaagactgttggccgtaggtcc
cggcgccagcttggtgaacgagtacatttttgtgtccgctgtgactttccaattgctatt
tatggacgtctgagcccatgtgatcatgccttctgtttagattgttccaggagtgattct
ctctgctacctctgtgatgaacgaattcagaagattcagacaattaaattgatggaaggg
atctacatctgtgcagctccgcattgtctcaagtcctttctgaagaagtctgaatttgaa
tctcatattcatgagaaccacagtgatctccttcatcaaactgcagaaaaagatggaaat
gcttcggaatctgcttgtgctagaaaacctgcagcatctgagtctacggtgcaagcacca
cctaggcctttattttcccctagttcaggttctcaggtacatgatcgtgaagacaaagct
catcattctcaaactagagatcaacagcctcctaggcctgttatgcaaccaaagccgcca
ccattcaccgggtcaatccaaaatcatcaactagagcaatctgatagtaatccccctcca
ggctttgaaaggcctggcatgcaaaaccggttacctcagcaaggttttgacacacaggtt
cactttccggacaagaaacaagggattatgggaggttccccttttcctgaatatcctatg
cagatgccacaacctcacggctttgctgtgccgatgaattcgaatccaggtttggctcct
caatttggttataatcagtttgcacctgatggagcccaaccattttatagtgctgcttca
actcctgagatgggaggatcagaacaagggtccttgctaggttttccacctggtgctgca
ggaaatatgaatttcccagaaaattaccctcggcaatggaatatggggcccgctgcagtt
caacctcctccggatggtttcgtaagcggtactgatcctcaaggaagagcggtctttttc
caaggagactatggaaggaacaacggtgtaatgccctcgaacctgccacctccgccttca
accaacagaggaatggaaggtggactgagtagtaattcaatggacaccagagataataat
aagggtatattgatgccgccgcaacctatgtccctcccaccacccccacctttacctcat
cacatgtcacaacaccagagaggggggagacactacttgggtgatggacatgatggacag
ggctatggttggcaacatgaaaagcgtgatagtttcggaagcaaccaggactag
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