Lycium barbarum (goji berry): 132631575
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Entry
132631575 CDS
T09483
Name
(RefSeq) DNA damage-binding protein 1 isoform X1
KO
K10610
DNA damage-binding protein 1
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03420
Nucleotide excision repair
lbb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132631575
09124 Replication and repair
03420 Nucleotide excision repair
132631575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132631575
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132631575
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
132631575
DNA repair and recombination proteins [BR:
lbb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
132631575
TCR (transcription coupled repair) factors
Cul4-CSA complex
132631575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
132631575
NCBI-ProteinID:
XP_060203147
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All DBs
Position
3:complement(76115169..76141218)
Genome browser
AA seq
1095 aa
AA seq
DB search
MSVWNYVVTAHKPTNVTHSCVGNFTAPQELNLIIAKCTRIEVHLLTPQGLQCICLQPMLD
VPIYGRIATLELFRPHGETQDLLFVATERYKFCVLQWDAEASEVITRAMGDVSDRIGRPT
DNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCPKP
TIVVLYQDNKDARHVKTYEVSLKDKDFIEGPWAQNNLDNGASLLIPVPPPLCGVLIIGEE
TIVYCSASAFKAIPIRPSITRAYGRVDADGSRYLLGDHNGLLHLLVITHEKEKVSGLKIE
LLGETSIASTISYLDNAFVFIGSSYGDSQLVKLNLQPDTKGSYVDVLERYVNLGPIVDFC
VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSATDDLYDT
FLVVSFISETRVLAMNLEDELEETEIEGFDSQVQTLFCHDAVYNQLVQVTSNSVRLISST
SRDLKNEWFAPAGYSVNVATANATQVLLATGGGHLVYLEIGDGVLNEVKYAKLDYDISCL
DINPIGENPNYSPIAAVGMWTDISVRIYSLPDLNLITKEQLGGEIIPRSVLMCSFEGISY
LLCALGDGHLLNFVLSMSTGELTDRKKVSLGTQPITLRTFSSKDATHVFAASDRPTVIYS
SNKKLLYSNVNLKEVSHMCPFNVAAFPDSLAIAKEGELTIGTIDEIQKLHIRSIPLGEHA
RRISHQEQTRTFALCSVKYTQSNSDDPEMHFVRLLDDQTFEFISTYPLDQFEYGCSILSC
SFSDDSNVYYCVGTAYVMPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGK
LLAAINQKIQLYKWASREDGGSRELQTECGHHGHILALYVQTRGDFIVVGDLMKSISLLI
FKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERSRLEV
VGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHDQYLFLEKLQ
TNLRKVIKGVGGLSHEQWRSFYNEKKTVDAKNFLDGDLIESFLDLSRNRMEEISKAMTVP
VEELMKRVEELTRLH
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtatggaactatgtggttacggcacacaagccaacgaacgttacacattcctgt
gttggcaatttcaccgctcctcaagagctcaatcttatcattgcgaaatgtactcgaatc
gaggttcatttactcactccccaaggtttacagtgcatttgtctgcagccaatgttagat
gtgccaatatatgggaggatcgcgacactcgagcttttccgtccccatggtgaaacacaa
gatctcctctttgtcgcaacggagcgatataaattctgtgtccttcaatgggatgctgag
gcatctgaagttatcacaagagcaatgggagatgtctcagatcgaataggccgtcccacg
gataatggtcagattggtataattgatccagactgcagattgattgggctgcatctttat
gatgggctatttaaggttattccatttgataacaaaggccaactgaaggaagcttttaac
atcaggcttgaggagcttcaagttttggatattaaattcttgtatggttgcccaaagcct
acgattgttgttctatatcaggataacaaggatgcccgacatgtcaaaacatatgaggtg
tccttgaaggataaagattttattgaagggccatgggctcagaataatctcgataatgga
gcttctttgctaataccagtacctccgccactgtgtggtgtactgattattggagaagaa
accatcgtttattgcagcgcttcagcttttaaggctatcccaattagaccttctatcaca
agagcatatgggcgggttgatgctgatggttctcgatatttgcttggggatcataatgga
cttcttcacctacttgtaatcactcatgaaaaggagaaagttagcggactcaaaattgag
ctactgggagaaacttcaattgcatcaaccatatcatacctagacaatgcttttgtcttc
attgggtcaagctacggagattcacagctcgtgaagctcaatctccagcccgacaccaaa
ggttcttatgtggatgttctagagagatatgtcaatttgggaccaattgtggacttctgt
gttgttgacctggagaggcaaggtcaaggtcaagttgtgacttgctctggagcctataag
gatggatcgcttcgtattgttcgaaatggaattggcataaatgaacaggcgtctgtggaa
ctacaagggatcaaaggaatgtggtctcttagatcagctactgatgatctgtatgacaca
ttcttggttgttagctttattagtgagacacgcgttttggctatgaaccttgaggatgag
ctggaagaaactgagatagaaggcttcgattctcaagtacagaccttgttttgtcatgat
gctgtatacaaccagcttgtacaggttacttcaaattctgttagattgatcagttctacc
tctagagatctgaaaaacgaatggtttgctccagccggctactcagtgaatgttgcaact
gctaatgctactcaggtactgttggctactgggggtggccatctggtatacctagaaatt
ggtgacggggtgttgaatgaagtaaaatatgccaagttggattatgacatctcgtgcctg
gacataaatccaattggtgaaaatccaaactacagtcccattgcagcagttggaatgtgg
acagacataagtgtcaggatatattcccttccagacttgaatctcattacaaaggagcaa
ctaggaggggagataattcctcgctctgttcttatgtgttccttcgaagggatatcttat
ttactatgtgctttgggagatggccatctcttgaattttgtgctgagcatgagtactggt
gagctgacagataggaaaaaagtctctcttgggacccagcccataacacttcgtacattc
tcatctaaagatgccacacacgtctttgctgcctccgataggcccacagtaatttacagc
agtaacaagaagctgctttatagcaatgtaaatctaaaagaagttagtcatatgtgccca
ttcaatgttgcagcttttccagacagtcttgcaatcgcgaaagaaggtgagttaacaatt
ggcactattgatgaaattcaaaagcttcacatccgttcaataccccttggggagcatgca
cggcgcattagccatcaagagcagacccggacatttgctctatgcagcgtaaagtatact
cagtcaaattcagatgatcctgaaatgcattttgtccgcctgttagatgaccagacattt
gagttcatatcaacgtacccccttgaccaatttgaatatggttgttccatacttagctgc
tccttttctgatgatagtaatgtgtattattgcgttgggactgcatatgtgatgccagag
gaaaatgaacctaccaagggccgaattttagtttttatagttgaagatggaaagctccaa
ctaattgcagagaaggaaacaaagggagctgtctactctctaaatgccttcaatgggaaa
ctgcttgctgcaatcaatcagaagattcaattgtacaagtgggcttcacgtgaggatggt
ggcagccgagaattgcagacagaatgtggacaccatggtcatatattagctctttatgtt
caaacacgtggggattttattgtcgttggtgatttgatgaagtccatttctctgctgatt
ttcaagcatgaggagggtgctatagaggagcgagcccgagactataatgcaaattggatg
tcagcagttgagattctcgatgatgacatttatcttggtgctgagaacaactttaacctt
ttcacggtcaggaaaaatagcgaaggtgctacagatgaggagcgcagtcgtcttgaagtg
gttggtgaataccaccttggtgaatttgttaataggtttagacacggttcgcttgtcatg
cgactgccagattcagacgttggccagatacccaccgtcatatttggcacagtaaatggt
gttataggggtcattgcctcgcttcctcatgatcagtatttatttttggaaaagctgcag
acaaacttacggaaagtgataaagggtgtgggaggactgagtcatgagcagtggaggtcg
ttttacaatgagaagaaaaccgtagatgctaaaaactttcttgacggtgatttgattgaa
tcattcctagatcttagcaggaaccggatggaagagatttctaaagcaatgacagttcca
gttgaggaactaatgaagagagtagaagagttgacaaggttgcattag
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