Lycium barbarum (goji berry): 132631605
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Entry
132631605 CDS
T09483
Name
(RefSeq) protein DAMAGED DNA-BINDING 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03420
Nucleotide excision repair
lbb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132631605
09124 Replication and repair
03420 Nucleotide excision repair
132631605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132631605
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132631605
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
132631605
DNA repair and recombination proteins [BR:
lbb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
132631605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR75_1st
WD40_WDHD1_1st
Beta-prop_EML_2
WD_LRWD1
EIF3I
NBCH_WD40
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
132631605
NCBI-ProteinID:
XP_060203211
LinkDB
All DBs
Position
3:86048871..86055596
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AA seq
538 aa
AA seq
DB search
MAPQTRRSSFPQVVIEKDTDSEESSSDDEDVEEEEETNVVVLPEEETIVESKKKGKTPIT
ISLKKVCKVCKKTGHEAGFRGATYVDCPMKPCFLCKMPGHTTVTCPHRVATEYGTVPAPR
KNTTNSLEFVFQRQLQPRVPPIKPAHVIPDQVHCAVIRYHSRRVTCLEFHPTNNNILLSG
DKKGQLGIWDFAKVHEKTVYGNIHSCILNNMKFNPTNYGSIYAASSDGTISCTDIETGIS
LSLMNLNPNGWEGPSSWRMLYGLDVNSDRSVVLVADNFGYLYMADIRSNNIMSKPILIHK
KGTKVVGLNCNPLQPDLLLSCGNDHFARIWDIRRLEAGSSLYNLEHKRVVSSAYFSPLSG
SKILTTSLDNRIRVWDSIFGNLDYPSREIVHSHDFNRYLTAFRAEWDAKDSSESLVVIGR
YISENYDGAALHPIDFINVSTGQLVAEVMDPNITTISSVNKLHPREDILASGSSRSLFIW
MPKKQDIAQPREEKRILLCGEVSKKRSKKHGDNGDDDSDNDIFRSKDNGLKQKKLPSK
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggctccacaaaccagaagaagttcgtttcctcaagtagtaatcgaaaaagacaccgac
tccgaagaaagctcgtcggatgatgaggatgttgaggaagaagaagaaactaatgtggtg
gttttacctgaagaagagacaatagtagagtcgaagaagaaagggaaaacacccatcacc
attagtctcaagaaagtttgcaaagtttgcaaaaaaactggtcatgaagcaggcttccgg
ggtgccacgtatgttgattgccctatgaaaccatgttttctctgcaaaatgcctggtcac
accacagtgacttgcccccacagagtagctacagaatatgggactgtccccgcgccacgc
aagaacacaactaattctttggaatttgtttttcaacgccagcttcaaccacgggttcct
ccaatcaagccagcacatgtgatcccagatcaagtccactgtgcagttatcaggtaccac
agtaggcgagtcacatgcttggagtttcatcctacaaacaacaatattcttttatctggt
gataagaaaggccaacttggcatctgggattttgctaaagtacatgaaaagacagtatat
gggaatatacacagttgtatacttaacaacatgaagttcaacccaacaaattatggatcg
atatatgctgcttcatcagacggaacaatcagttgtactgacatagagactgggatttca
ttgtcactaatgaaccttaatccaaatgggtgggagggaccaagcagttggaggatgctt
tatgggttggatgttaactcagacagaagtgttgtccttgttgctgataattttggatat
ctttacatggctgatatacggagcaataacataatgagcaaacctattttaattcacaag
aaaggaactaaagttgttggtctaaactgcaatcctcttcaaccagatctgcttttgagc
tgtgggaatgatcactttgctcgaatatgggatatccgccgcttggaagctgggtcttct
ctttataatcttgaacataaacgtgttgttagttctgcatatttttctccactaagtgga
agcaaaatacttactacttcactggataatcggattcgtgtgtgggattcaatctttggc
aacctcgattatccaagccgagaaattgttcacagtcacgattttaaccgatatcttaca
gcattccgagcagaatgggatgcaaaggactcatcagagtctcttgttgtcattgggcgt
tacattagtgaaaattatgatggagctgctttgcatcccattgactttatcaacgtcagt
actgggcagttggttgcagaggtcatggacccaaacataacaacaattagctcggtgaac
aagctacatccacgtgaagatattctggcgtctggtagttcaaggtctcttttcatttgg
atgcctaagaagcaggacattgcacagcctagagaagaaaagaggattttattatgtggg
gaggtcagtaaaaaacgtagcaagaagcatggtgataacggtgatgatgattccgacaat
gatatattcagaagcaaggataatggcctcaagcagaagaaacttccatcaaaataa
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