Lycium barbarum (goji berry): 132631930 Help Entry 132631930         CDS       T09483                                  Name (RefSeq) endoribonuclease Dicer homolog 1   KO K11592   endoribonuclease Dicer [EC:3.1.26.-] Organism lbb  Lycium barbarum (goji berry) Brite KEGG Orthology (KO) [BR:lbb00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:lbb03036]     132631930 Chromosome and associated proteins [BR:lbb03036]  Eukaryotic type   Gene silencing    RISC (RNA-induced silencing complex)     132631930    microRNA pathway     RISC loading complex      132631930 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer PAZ Helicase_C dsrm DND1_DSRM DEAD ResIII Dicer_PBD SWI2_SNF2 SLFN-g3_helicase SNF2-rel_dom Flavi_DEAD Piwi Cas3-like_C_2 TrbI_Ftype Motif Other DBs NCBI-GeneID:  132631930 NCBI-ProteinID:  XP_060203664 LinkDB All DBs Position 1:12141371..12167910 Genome browser AA seq 1898 aa AA seqDB search MDGDDGRVSEKPSYWLDACEDISCDDLIQDFVPGSTALPVPPLNQLGPDGSLDPCFFGGI DRILEKLKNGDDFIPKSDSKDSAAPEISKYNGPQVNKDTEQKKSLDEGNGFRHKERDYYD KEERNGKRARLGGDSYQRRGGRGRPLGRKRLRESDEMNRVERDQRKRRESRGGGGGGRDR DWREGRGYWEWDKERKEMVHRVGSWEADRNREGKLPTERSLEASGVVEKKDDKPKEQAPK EQARKYQLDVLEHARKNNTIAFLETGSGKTLIAILLMKSLCSDLQKKNKKMLAVFLVPKV PLVYQQAEVIRDQTGYQVGHYCGEMGQDFWDARKWQREFETKQVLVMTAQILLNILRHSI IKMEAINLLIMDECHHAVKKHPYSLVMSEFYHTTQKEKRPSVFGMTASPVNLKGVSSQVD CAIKIRNLETKLDSVVFTIKDRKELEKHVPMPSEIVVEYDKGANLWSLHEQIKQMELAVE EAARASSRRSKWQFMGACDAGASAELRQVYGVSERTESDGAANLIQKLRAINYALGELGQ WCAYKVAHSFLTALQNDERASYQLDVKFQESYLDKVVSLLQCQLSEGAIAESNLNGEMDK GDNPNSDRPDEMEEGELLESHVVSVGEHVDVILGAAVADGKVTPKIQSLIKILLKYQHTE DFRAIIFVERVVTALVLPKVFEELPSLSFITSSSLIGHNNTQEMRTGQMQDTIAKFRDGR INLLVATSVAEEGLDIRQCNVVIRFDLAKTILAYIQSRGRARKPGSDYILMVERDNSSHE AFLRNARNSEETLRKEAIERTDISHLKGAISREAPTDSVYQVESTGAVVSLNSAVGLIHF YCSQLPSDRYSILRPEFIMERHEKSGCATEYSCRLQLPCNAPFEKLEGPVCSSMRIAQQA VCLDACKKLHQMGAFTDMLLPDKGSGVELEKVEQDDESDPIPGTSRHREFYPEGVADILR GDWILSGKDSCDSSKLTHLYMYAIKCVNVGTSKDSFLTDVSEFAILFGNELDAEVLSMSM DLFIARTVVTKATLVFRGAIDVTESQLASLKSFHVRMMSIVLDVDVEPSTTPWDPAKAYL FALVTGDESGDPAKDINWDHINKITKTDVWSNPLQRARPDVYLGTNERALGGDRREYGFA KLRHGMAFGLKSHPTYGVRGAIAHFDVVKASGLVPNRSSLDMVEIDKIVMADCCLRAEDI VGRIVTAAHSGKRFYVDSIRNDMTAENSFPRKEGYLGPLEYSSYAAYYKQKYGVDLVYKK QPLIRGRGVSYCKNLLSPRFDHSEEHEGELEESTDKTYYVFLPPELCFLHPLPGSLIRGA QRLPSIMRRIESMLLAVQLKEMIGYPVPALKILEALTAASCQETFCYERAELLGDAYLKW VVSRYLFLKYPEKHEGQLTRMRQQMVSNMVLYQNALSKGLQSYIQADRFSPSRWAAPGVL PVYDEDTNEEEESSMFDHETTENGTVAAMAALAGDEFEDDETEEGELDNDSGSYRVLSSK TMADVVEALIGVYYVEGGKYAANHFMKWIGVEVDFNFNFKETEYSIRPYSIPENVLRSVD FDALQGALNITFNDKGLLLEAISHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTD LPPGRLTDLRAAAVNNENFARVAVKHSLHLHLRHGSSALEKQIRDFVNEVKNEQSKPGFN SFGLGDCKAPKVLGDIFESIAGAIFLDSGCNTKVVWEVFQPLLHPMVTPETLPMHPVREL QERCQQLAQGLEYKATRSGNIATVEVYVDGLQVGMAQNPQKKMAQKLAARNALVVLKDRE EAEAKKADDGKNKKNGNPSFTRQTLNDICLRRNWPMPLYRCVHEGGPAHAKRFTYGVRVN TSDKGWTDECIGEPMPSVKKAKDSSASLLLELLNRWYS NT seq 5697 nt NT seq  +upstreamnt  +downstreamnt atggatggtgatgatggtagagtttctgagaaaccctcttactggcttgatgcttgtgag gatatctcatgtgatgatcttatacaagattttgtccccgggtcgaccgctctacccgtt ccgccattgaatcaattgggtccggatgggagtcttgatccttgtttctttggtggtatt gatcggatacttgaaaaattaaagaatggtgatgatttcataccgaaatcggatagtaaa gattcagctgcacctgaaatttccaagtacaatgggccacaagttaacaaggatacagag caaaagaagtctttagacgaaggaaatggatttaggcataaggaacgagattattatgat aaagaagagagaaatggaaaaagggcgcgacttggtggtgatagctaccagaggagagga gggcgtggtagacctttgggcaggaagagactccgcgagagtgatgagatgaatagagta gagagggatcaaagaaaaagaagagaaagtcgtgggggtggcggcggtggaagagatagg gactggagggaagggaggggctattgggaatgggacaaagaaaggaaagagatggttcat cgtgtgggttcatgggaagccgatagaaatcgagagggaaagttaccaactgagagaagc cttgaagcttctggagttgttgagaagaaagatgacaaaccaaaggaacaagctcccaag gagcaagcacgcaagtatcagttggatgtacttgaacatgccagaaagaacaataccatc gcttttcttgaaacaggatctggaaaaacgcttattgctatcctcctcatgaagagtcta tgtagtgatttgcaaaagaagaacaagaaaatgctggcagtttttctggttcctaaagtt ccacttgtttatcagcaagcagaagttattcgtgaccaaactggttatcaagttggccat tattgtggtgagatgggccaagatttttgggatgcacgaaagtggcagcgtgagtttgaa actaaacaggtcctggttatgactgcccagattcttttgaacatcttgaggcacagtata ataaaaatggaagcaattaatctccttattatggatgaatgtcatcatgctgtgaagaag catccatattctttagtcatgtctgagttctatcatacgacacaaaaggagaaaaggcca tctgtttttggcatgactgcttcacctgttaacttgaagggtgtttccagccaagttgat tgtgcaataaagattcgtaatttggagactaaattagattcagtcgtctttaccataaag gaccgcaaggagctggagaaacatgtcccaatgccgtcagaaatagtagtggagtatgat aaaggtgctaatctgtggtcccttcacgaacaaataaaacaaatggaattagcagttgaa gaagctgctcgggcaagttccagaagaagtaaatggcagtttatgggcgcttgtgatgct ggagctagtgcagagctgcgccaagtctatggtgtatctgaaagaactgaaagtgatggg gctgctaatctaattcaaaagttgagggctattaactatgctcttggtgaactgggacag tggtgtgcctataaggtagcacattcttttttgacagctctacaaaatgatgaaagggca agctaccagcttgatgtcaagttccaagaatcctacctggataaggttgtctctctcttg caatgccagttatcggagggagccattgcagaaagtaacttgaatggcgagatggataaa ggtgataatccgaatagtgatcggcctgacgagatggaggagggcgagcttcttgaaagt cacgttgtatctgttggagagcatgtagatgtgattctaggagctgctgtggctgatggg aaagtgacaccaaaaattcaatcattaattaagatacttctcaagtatcagcatactgag gattttcgtgctataatattcgttgaacgcgttgtgactgccttggttcttccaaaggtt tttgaggagctcccttccctaagttttatcacttcatcaagtttaattgggcacaacaat actcaagaaatgcgaacaggtcaaatgcaagatacgatagccaagtttcgagatggtcgt attaatttgttagttgccactagtgttgctgaggaaggacttgacatccggcaatgcaac gttgtcatccggtttgacctggccaaaactattttggcgtatatccagtctaggggccgt gcccgtaagcctggatcagattatattttgatggttgagagggataattcatcacatgaa gcatttctgaggaatgccagaaacagtgaagagacgttgcggaaagaagcaattgaacgg actgatattagtcatctcaaaggagcgatctctcgggaggcaccaacagattcagtttat caggtggagtccactggagctgttgtgagcttaaattctgctgttgggttgatccacttc tattgctcccaattaccaagtgacaggtactcgattctccgtcctgagtttataatggag cgtcacgagaagtcaggttgtgcaaccgaatattcatgcaggcttcaactcccctgcaat gcaccgtttgagaaacttgagggccctgtatgcagctcaatgcgcattgcacagcaggct gtttgcttggatgcttgcaagaagctccaccagatgggggcattcacggacatgctcttg ccagacaagggaagtggggtggagttggagaaagttgaacaggatgatgaaagtgatcca attcccggaacttcccggcacagggaattttatcccgaaggtgttgctgatattctgagg ggtgattggattttgtcggggaaggattcgtgtgacagctcaaagttaactcatctctat atgtatgctatcaaatgtgtgaatgttggcacctcgaaggactcattcttaactgatgtg tcagagttcgctatactgtttggcaatgagctggatgcagaggtattatcgatgtcgatg gatttatttattgctcgaacagtagtaacgaaggcgactcttgtcttcagaggggcaata gacgttacagagtctcagttggcgtcccttaagagctttcatgtaagaatgatgagcatt gttttggatgttgatgttgagccgtccaccactccttgggacccagcaaaggcatatcta tttgcccttgttactggtgatgaatctggagatcctgcaaaagatatcaactgggatcat attaacaaaattactaaaactgatgtatggagcaatcctcttcagagagctcgcccagat gtgtatcttggcaccaatgagcgtgctcttggtggagaccgaagggaatatgggttcgca aaattgcgacatggtatggcctttggactgaagtctcatccaacatatggtgttagaggt gctattgcacactttgatgtggtcaaagcatctggattggtccctaaccggagtagcctt gatatggttgaaattgacaagatagtgatggctgactgttgtcttagagcagaagatata gtaggaagaattgtcactgctgctcattctggaaagagattttatgttgattccattcgc aatgatatgactgccgagaactcatttcctaggaaagaaggttaccttggtcctcttgag tacagcagttacgctgcttattataagcaaaaatatggagttgatttggtttataaaaag cagcctctaataagaggccgcggtgtttcatattgcaagaaccttctgtcaccacgattt gatcattcagaagaacacgagggtgaactcgaagagtcaaccgacaaaacgtattatgtt ttcctccctcctgagctctgtttcttgcatccacttccgggatcccttattcggggtgct cagagattgccctcgatcatgaggaggattgagagcatgctgcttgctgttcagcttaag gaaatgattggttaccctgtcccagcactgaagatcttggaagcactgacagccgcatct tgccaggagacgttctgctatgagagagcagaacttcttggagatgcatatctgaaatgg gttgttagtcggtatcttttcctcaagtatcccgagaaacatgaaggtcaacttaccagg atgagacaacaaatggtaagcaacatggtgctgtaccaaaatgccttaagtaaaggactc caatcatacatccaagcagatcgattttctccatcgagatgggctgctcctggggtgttg cctgtttatgatgaggataccaatgaagaagaagaatcgtcaatgtttgatcatgaaaca acagaaaatgggactgtagcagcaatggcggctctagctggtgatgagtttgaagatgat gaaacggaagaaggtgagcttgataatgattcaggttcatatcgtgtactctctagcaag acgatggctgatgttgtggaagcactgattggagtatattatgttgagggtggaaagtat gctgcaaaccacttcatgaaatggattggggttgaggttgatttcaatttcaatttcaaa gagactgaatactctattaggccttatagcattcccgagaatgtactcaggagtgttgac tttgatgcattacaaggtgctttgaacatcaccttcaatgataaaggcctactgctagaa gcaattagccatgcttcacgtccgtcttcgggagtctcctgttatcaaagacttgagttt gtgggtgatgcagtattagaccatctcatcacgaggcacttgttctttacatacacagat cttcccccaggccgattgaccgacttgcgagctgctgctgtgaacaatgagaatttcgca cgcgttgctgttaaacacagccttcatttacaccttcgtcacggatccagtgctctagaa aagcagattcgtgactttgtgaacgaggttaaaaatgaacaatcaaaaccaggtttcaac tcctttggtttgggggattgcaaagctcctaaagttcttggtgatattttcgaatcaatt gctggggctatttttctcgacagtgggtgtaatactaaagttgtatgggaggttttccaa ccactgttgcatccgatggtcacaccagaaacactgccaatgcatccagttcgtgaactg caagagcgttgtcaacaactagctcaaggcttagagtacaaagcaactcgaagtgggaat atagctacagttgaagtatatgtggatggtcttcaggttggaatggcgcagaatcctcag aaaaaaatggcacagaagttggctgccaggaatgcccttgttgtgttgaaagacagggag gaagctgaagctaagaaggctgatgatgggaagaataagaagaatggaaacccgagtttt actaggcagacattgaatgatatatgcttacgcagaaattggcctatgccactgtatcga tgtgtgcacgagggtggtccagcacatgcaaagaggtttacatatggtgtacgcgtaaat acttcggacaaagggtggacagatgaatgtatcggggaacctatgccgagtgtaaagaaa gccaaggattcttcagcatctcttcttttggaactcttaaatagatggtactcataa

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