Lycium barbarum (goji berry): 132632275
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Entry
132632275 CDS
T09483
Name
(RefSeq) alanine--tRNA ligase isoform X1
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132632275
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lbb01007
]
132632275
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbb03016
]
132632275
Enzymes [BR:
lbb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
132632275
Amino acid related enzymes [BR:
lbb01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
132632275
Transfer RNA biogenesis [BR:
lbb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
132632275
Prokaryotic type
132632275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
DHHA1
Motif
Other DBs
NCBI-GeneID:
132632275
NCBI-ProteinID:
XP_060204129
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All DBs
Position
3:124848052..124867523
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AA seq
1012 aa
AA seq
DB search
MRVSIDGCSWRCIASALPFFRPPPATTTTTTTTTLVPFLPFAGASLLPPWPAARRFCASA
AMGSHVDWPANKVRETYMNFFKGKGHQQVPSSPVVPHNDPTLLFANAGMNQFKPIFLGIV
DPNSPLSKLTRACDTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIGW
AWELLTQVYRLPGERLYATYFGGDEKLGLPADNEARDLWLKFLPPSRVLPFDCKDNFWEM
GDTGPCGPCTEIHFDRIGNRDAASFVNNDDPTVIEIWNVVFIQFNREADGSLKPLPSKHV
DTGMGFERLTSILQNKMSNYDTDVFLPIFDAIQKATGARPYSGKVGADDVDKIDMAYRVV
ADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGTEVLKAQQGFFSSLVKVVVEIMG
DVFPELKQRETHIRDIIADEETSFGRTLLHGIEKFKKAAQEVQGKQFSGQEAFVLWDTYG
FPLDLTQLMAEERGLVVDVDGFNVAMDAARERSRNAQSKNAGGAIAMDANATAALHNKGV
AATNDIFKFTWFQDHESEIKAIYTGSEFLESAAAGDEVGIILESTSFYAEQGGQIYDTGS
LESPSGAFQVCNVQIYGGFILHIGSFSGQAHKFSVGDKVICKVDYNRRTLIAPNHTCTHM
LNFALKEVLGDHVDQKGSIVLPEKLRFDFSHGKPVKPEELRKIESIVNEQIKSELDVFSK
EAKLSDAKSIKGLRAVFGEVYPDPVRIVSIGQKVEDLLANPENEEWLSYSAELCGGTHIS
NTREAKAFALMSEEGIAKGIRRVTAVTTYRAFEATDLASSLEQKVIEASQTDETLLEEKV
TSLNATVERAQIPTVKKTDLKAKLSVLQNQVIKAKKKIAAENIQKAVKAASEMAEAAASG
GKAYCILQIGVGLDTAAVREAVVKVMEQKGMAVLVFSKDEAANKVLVCAGVPEKGDKCQQ
LNVKEWLNAALKPLGGKGGGGKGGLAQGQATDISKVDEAMDVATSFAAMKLN
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgagggtttcaattgacggctgtagttggcgctgtattgcctcagctttgccctttttc
agaccacctcctgctactactactactactactactactacacttgttccatttttaccc
ttcgccggcgcgtcgcttcttcctccgtggccggccgcgcgtaggttttgtgcatcagcg
gcgatgggttcacacgtggattggccggcgaacaaggtgagggagacatacatgaacttc
ttcaaagggaaaggtcaccaacaggttccatccagccctgtggttcctcataatgaccct
actctccttttcgctaatgctggtatgaatcagtttaagcctattttcttgggtattgta
gaccctaatagtccgctgagcaaacttacacgtgcctgcgatacacagaagtgtattcgt
gctggtggaaagcacaatgatcttgatgatgttggcaaggacacttaccaccacactttc
tttgagatgcttggtaattggtcatttggggattatttcaagaaagaggccattggatgg
gcctgggaactccttacccaggtatatagattgccaggtgaacggctttacgccacttat
tttgggggtgatgaaaaattaggccttccagcggataatgaagctagagacctatggctt
aagttccttccgcctagcagggttctgcctttcgactgcaaagacaacttttgggagatg
ggtgatactggaccttgtggaccctgcaccgaaatacactttgatagaattgggaatcgc
gatgctgcatcatttgttaataatgatgatcccactgtgattgagatatggaacgttgtc
tttattcagtttaatagggaagctgatggttctttgaaaccccttccttctaagcatgtt
gatactggaatgggttttgaaagactaacctctatcctccagaacaagatgagcaattat
gacactgacgtgttcttacccatatttgatgctatacaaaaggcaactggagctcgtcca
tactctggcaaagttggagctgatgatgtggacaaaattgatatggcctatagagttgtt
gctgaccacattcgaactctgtcctttgccattgctgatggttcttgcccagggaatgaa
ggccgtgaatatgtcctcagacgcattctacgtcgagcagtgcgctatggtacagaggtt
ctgaaagcgcaacaagggtttttcagtagccttgtaaaggtggtggtagaaattatgggc
gatgtcttcccagagctgaagcaacgtgagacacatataagggatatcattgctgatgaa
gaaactagctttggaaggacattgcttcacggaatcgagaaatttaagaaggcagctcaa
gaggttcaagggaagcaatttagtggccaggaggcatttgtcttgtgggacacttatgga
tttccattagatttgacccagttaatggcagaggaacgaggcttggtggttgacgttgat
ggttttaatgttgctatggatgctgcgagggaaagatcaagaaatgctcagagcaagaat
gctggtggtgctattgccatggatgctaacgctactgctgcattgcacaacaaaggggtt
gctgcaacaaatgatattttcaagtttacttggtttcaggatcacgagagtgagataaaa
gctatttacactggaagtgagttcttggaaagtgcagcagcaggtgatgaagttggtata
attcttgagagcactagcttctatgctgaacaaggtggtcagatatatgacactggttca
ctggaaagccccagtggcgcttttcaagtttgtaatgttcaaatttatggaggattcatt
cttcatattggatctttcagtggacaggcacacaagttctctgttggtgataaagtaatt
tgtaaggttgattataacaggcgtacgttgattgctcccaatcatacctgcactcacatg
ttaaatttcgccttaaaggaagtactaggcgaccatgttgaccagaaaggttccattgtc
cttcctgaaaaattgagatttgacttctctcacgggaagccggtaaagccagaggagcta
agaaaaattgaatccattgtcaatgagcaaattaagtctgaattggatgtgttctcaaag
gaggcaaagctgtctgatgctaagagtataaaaggtcttcgagcagtctttggcgaagtg
tatcccgaccctgtgcggatcgtgtcaattggtcagaaggtggaagaccttcttgctaat
ccagaaaatgaagaatggttatcgtactctgctgagctctgtggtggaacacacatttct
aatacaagagaggcaaaggcatttgctctgatgtctgaggagggaattgccaagggaatc
cgaagggttactgctgttacaacttatcgtgcttttgaggccacagatttggcatcctca
ctcgaacagaaagtaattgaagcatcccagaccgatgaaaccttgctggaagagaaagta
acttctttgaacgctaccgtggagagggcacaaattcccactgttaagaaaactgatctc
aaggccaaactctctgttctccagaatcaagttataaaggccaaaaagaagatagctgca
gagaatatacaaaaagctgttaaagctgcctcagaaatggctgaagctgcagcttctggt
ggaaaagcatactgcatcttgcagattggcgtgggtttggacactgctgcagtccgtgaa
gcagttgtcaaagtcatggagcagaagggtatggcagttctggtatttagcaaagatgaa
gctgcaaacaaagttttggtctgtgcgggtgtacctgagaaaggtgacaagtgccagcag
ttgaatgttaaagaatggttgaatgcagctttgaagcccttgggaggaaagggtggagga
ggaaaaggtggtctcgctcaaggccaggcaactgatatatcaaaagttgacgaggcaatg
gatgttgcaacatcatttgcagccatgaaattaaattga
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