Lycium barbarum (goji berry): 132632323
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Entry
132632323 CDS
T09483
Name
(RefSeq) pseudouridine-5'-phosphate glycosidase isoform X1
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00240
Pyrimidine metabolism
lbb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
132632323
Enzymes [BR:
lbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
132632323
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GFIT
Motif
Pfam:
Indigoidine_A
DUF6750
Motif
Other DBs
NCBI-GeneID:
132632323
NCBI-ProteinID:
XP_060204190
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Position
3:126309875..126318414
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AA seq
339 aa
AA seq
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MASSPNSRLAILSRHFTSAASASKAGQNLGWIKISPEVSEALKHRSPIVALESTIISHGM
PYPQNFETAKELEVIVRENGAVPATIAILDGVPCIGLTTEELEILARLGSKARKTASRDI
ALVMAGRENGATTVSATMYLASMVGIPVFVTGGVGGVHRHGENTMDISSDLTELGNTPVA
VISAGVKSILDIPRTLEYLETQRVTVAAYKTDEFPAFFTQTSGCKAPARVESPEHCARVI
DANIRLGRKSGMLIAVPIPREHSASGSLIESAIQQALQEAREKKITGNAETPFLLARVNQ
LTGGASLASNIALVKNNASVGAKIAVSLAQLQKHSDKRL
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcacctaattctagattagcaatccttagtagacactttacttcagcagct
tctgcctctaaggctggtcaaaatttggggtggattaagatatctccggaggtttccgaa
gcattaaaacatagaagcccgattgtcgcattggaatcaactataatatctcatggaatg
ccgtatcctcaaaattttgagacagcgaaagagttggaggtcattgtgagggagaatgga
gctgtacctgccactattgctattctcgatggcgtaccatgcataggcttgactacagaa
gaactagagattctagcacgtcttgggagcaaagctcgaaaaactgctagtagagacatt
gcacttgttatggcaggcagggagaatggggcaactactgtctctgcaacaatgtatctt
gcttcaatggtcggtattccagtatttgtcactggtggtgttggaggagttcatagacat
ggagagaatacaatggatatttcttctgatcttactgagcttggaaatactcctgtagct
gtgatctccgctggtgtaaaatcgatactagatattcctcgaacgcttgaatatttggaa
actcaacgagttactgttgcagcttataaaaccgatgagttccctgctttcttcacacaa
accagtggctgcaaggcacctgctcgagtagaatcaccagaacattgtgctcgagttatt
gatgcgaacataagacttgggcggaagagtggaatgttgatagcagtccccattccaagg
gagcattctgcttctggaagtttgattgagtcagcaatacagcaagcactccaagaagca
cgagagaagaagattaccggcaatgctgaaactccattcttgcttgcaagagttaatcaa
ctcaccggtggagcatctctagcgtcaaacattgcactcgtgaaaaataatgccagcgtc
ggtgctaaaattgctgtttcgcttgcccagcttcaaaagcatagcgataaaaggttgtaa
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