Lycium barbarum (goji berry): 132632369
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Entry
132632369 CDS
T09483
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
132632369
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lbb04040
]
132632369
Ion channels [BR:
lbb04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
132632369
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
DUF6525
cNMP_binding
Ion_trans_2
Exop_C
Motif
Other DBs
NCBI-GeneID:
132632369
NCBI-ProteinID:
XP_060204264
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Position
3:complement(127408691..127429150)
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AA seq
771 aa
AA seq
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MDTYEKDEAPMLSPSYPQSDENDGFQNRRFAYRTRSASLSMPMSSMDSFENDSSFVGYTG
PLRSERRSPLVQMSGPLYIGREPVNSFRRTPTAVVDKPTLPTTEKYPSIRSTERNGWHNT
DYTGKNEHLLKSGQLGMCSDPYCTTCPTYYHLKARQRNSKSSDIFDHRFRNVLYGDAKGW
AKRTCTFLHPYIPGVMNPHAKIVQKWNKFFVISCLFAVFIDPLFFFLLYVHQGNKCIVLN
WPLTTTVVILRSITDIIYLMHILLQFRLAYVAPESRVVGAGDLEDHPKKIAINYLSGYFA
IDFFIVLPLPQIIILLILPMSIASSGANYAKNLLRAAILLQYIPRLCRFLPLLAGQSPSG
FIFESAWANFFINLLTFVLSSHVVGSCWYLFGFQRVNQCLRDACRGSKIARCMDFIDCGH
GNDYRKFSSEITWDQWKNNSEAVACFTDRGFDYGIYEQAVNLTTEKSVVTRYVYSLFWGF
QQISTLAGNQVPSYFVWEVIFTMAIIGMGLLLFALLIGNMQNFLQSLDRRRLEMSLRRRD
VEQWMSHRRLPVELRRQVQEAERYNWAATRGVNEEMLLENLPEDLQRDIRRHLFKFIKKV
RIFALLDEPIIDAICERLRQKTYIAGSKVLYRGGLVDKMVFVIRGKMESIGEDGNVASLC
EGDACGEELLTWCLEHSSINRDGKKIRIPGHRLLSNRLVRCLTNVEAFILRASDLEEVTN
LFARFLRSPRVQGALRYESPYWRGLAARRIQVAWRYRKKRQSRADSSSPQH
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggacacctatgaaaaagatgaggcgccgatgttatcaccatcatatccacagtctgac
gaaaatgacggcttccaaaatcgacgttttgcgtacaggacaaggagtgcatccctgtca
atgccaatgagctctatggattcatttgaaaatgatagtagttttgtaggctataccggt
cctttgagaagtgagaggcgatctccgttggttcagatgagtgggccattatatattggt
cgtgagcctgtgaatagctttcggcgcactcctactgcagtagtggataaaccaactctg
cctacaacagaaaaatatccttcaattagaagtacagaacgaaatggttggcataatact
gactacactggaaaaaatgaacatctgttgaagtctggacaactgggcatgtgcagtgat
ccgtactgcacaacatgtccaacctattaccatttgaaagcacggcaaagaaattcaaag
tcttcagatatatttgatcacaggttccgtaatgtgctgtatggagatgcaaaaggatgg
gcgaagagaacttgtactttcttgcatccatatattcctggtgtcatgaatcctcatgcg
aagattgtccagaagtggaacaaattttttgtcatctcatgcctatttgcagtgtttata
gatcccctattcttctttttgctttatgtccatcaggggaacaaatgcatagtgctaaat
tggcccctgacaacaactgttgtgattttgaggagcatcactgatatcatctacttaatg
cacatccttcttcagttccgcttagcttatgttgcccctgaatctagggtggtgggcgca
ggtgacctggaggaccaccctaaaaagattgctataaactatctctcgggatactttgct
attgacttctttatcgtattaccacttcctcagatcatcatactgttgattttacccatg
tctattgcatcatctggggcaaattatgcaaagaatctattgagggcagctatactactc
cagtacattcctagattgtgcaggtttttgcctttgctagctggccagtctccaagtggt
tttatatttgagtcagcatgggcgaattttttcataaatcttctcacttttgttttatca
agccacgtggtgggctcatgctggtatctttttggtttccagagggtgaatcaatgtctt
cgagatgcttgtcgtggatcaaagatagcgaggtgtatggatttcatagactgtggtcat
ggcaatgattacagaaagtttagttcggagataacatgggatcagtggaagaacaattct
gaagcagttgcttgttttactgatcgtggttttgactatggaatctatgaacaagctgtt
aatctaaccactgaaaagagtgttgtcacaagatatgtgtactcattgttttggggcttc
cagcaaattagtacactagctggcaatcaagtcccaagttattttgtgtgggaagttatt
ttcacaatggctatcatcggaatgggactcctgctttttgccctcctgattggaaatatg
caaaactttttgcagtctctagatcgcaggaggttagaaatgtctctgagacgtcgtgat
gttgaacaatggatgagccatagacgcttgccagtagaattgagaaggcaagttcaagag
gcagagagatataattgggcagctaccagaggggtcaatgaagaaatgctactagagaat
cttcccgaagaccttcaaagagatatacggaggcatctttttaaattcatcaaaaaggtt
cgaatattcgcacttctagatgaacccatcatagatgccatctgtgagagattgagacag
aaaacatacatagcaggaagcaaagttttataccgtggtggtctagttgacaagatggtt
ttcgtaattcggggtaagatggaaagcattggagaagatgggaacgtggcctccttgtgt
gaaggggatgcctgtggggaagaactcctcacatggtgccttgagcattcttctataaac
agagatgggaaaaagatcagaattcctggacacagattgctgagcaacagactggttagg
tgcctgacaaatgttgaagcatttatattgcgagcgtcagatctcgaagaagtcactaat
cttttcgcaagattcttgcggagtccacgcgttcaaggtgccctaaggtatgaatctcca
tattggcgagggctggcagcaaggcggatacaagttgcatggagatacaggaagaaacgt
caaagccgagcagactcttccagcccccaacactaa
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