Lycium barbarum (goji berry): 132632399
Help
Entry
132632399 CDS
T09483
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbb04131
]
132632399
04121 Ubiquitin system [BR:
lbb04121
]
132632399
Enzymes [BR:
lbb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132632399
Membrane trafficking [BR:
lbb04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
132632399
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132632399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-C3HC4_3
zf-RING_16
DUF7129
zf-RING_5
Zn_ribbon_8
zf-Nse
zf-RING-like
Ribosomal_S27e
zf-RING_Vps41
Zf_IFT144_1st
Prok-RING_4
Zn_Ribbon_TF
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
132632399
NCBI-ProteinID:
XP_060204306
LinkDB
All DBs
Position
3:complement(127949512..127952737)
Genome browser
AA seq
387 aa
AA seq
DB search
MSSTGAITKNYHCYECEHTVTITSSPNSELTCPNCNSAFLEDSDTAPIPNPNPNNNNHPF
FSAATSDDLPFGGAAAGGFPIVFSSSSAGGAGNSVPFDDLNALFNGMSGAGSGRSNNQFD
PFAFLNNYFNTMRAGGAGGGANVQLIFENHPGGEFRVPGNLGDYFLGPGLEQLIQQLAEN
DPNRYGTPPASKSVVAGLPDVKIKEELLDSDSSQCAVCKDTFELGEVAKQIPCKHIYHKD
CIMPWLEMHNSCPVCRYELPTDDPDYENRKTSQSQTANTSNVNTNTSSNNNNNSNSVNDN
TNNTGWIFGGSEGGGGNQENSRTGERRLRIPLQWLFRGLGSPAETSNSGGASNDTNNRNN
NNNTSNDGPREESNPDSGGQARQEDLD
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgaccggagcaataacgaagaattaccactgttacgaatgtgaacatacagtc
accattacatcatcaccaaattccgaactcacttgtcccaattgcaactccgcctttcta
gaagattccgatacggccccaatccctaaccctaaccctaacaacaacaaccaccccttc
ttctccgccgccacctccgatgacctcccattcggaggcgccgccgccggcggattccca
atcgtcttctcctcctcctccgcaggcggcgccggtaattccgtccctttcgatgatctc
aacgctctatttaacggtatgtctggtgctggttcgggtcgatccaacaatcaatttgac
ccgtttgcttttctcaacaactatttcaatactatgagagctggtggtgctggtggtggt
gcgaatgttcagttgatatttgagaatcatcccggtggtgaatttagggttccagggaat
ttgggggattattttcttgggccggggcttgagcaattgattcaacagctagcggaaaat
gatccgaatcgttatggtacgccaccggcttcgaaatcggttgttgctgggcttcctgat
gttaagattaaagaggagttgttggattcggattcgtctcaatgtgctgtttgtaaagat
acttttgaactcggtgaggtggcgaaacagataccttgtaaacatatatatcataaggat
tgtataatgccgtggttggaaatgcataattcttgccctgtttgtcggtatgagttgcca
actgatgatcctgattatgagaataggaaaacatcgcagtctcagactgctaatactagt
aatgtgaataccaatactagtagtaataataataataatagtaattccgtcaacgacaac
accaataatactggttggatatttgggggttcagaaggtggtgggggaaatcaggagaat
tctcgaacaggagagaggaggcttaggataccattacaatggctttttaggggacttgga
tcacctgctgagacgagcaacagtggaggagcgagcaatgatactaacaatcgcaacaac
aacaataatacgagcaacgatggtcctcgtgaggagtctaatccggattctggagggcaa
gcgaggcaggaggatctcgattaa
DBGET
integrated database retrieval system
