Lycium barbarum (goji berry): 132632465
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Entry
132632465 CDS
T09483
Name
(RefSeq) protein SUPPRESSOR OF PHYA-105 1-like isoform X1
KO
K16240
protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
132632465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132632465
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
132632465
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Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
ASA1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_C
DSE1_N
EIF3I
WD40_Gbeta
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Pkinase
Beta-prop_EML
Beta-prop_NOL10_N
Beta-prop_WDR35_TULP_N
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
Beta-prop_ACSF4
WD40_like
Motif
Other DBs
NCBI-GeneID:
132632465
NCBI-ProteinID:
XP_060204391
LinkDB
All DBs
Position
1:16170025..16181873
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AA seq
960 aa
AA seq
DB search
MDQSKEDVEANDVATNVLPKTTEDDISVEPSMRKSISTSLEFPEGPISSGSGTNNRYVMS
MKDTQPHGTSSYSLNSSRLTFEKLSSYKISEPASRRCSDNNRENNQKPQIQWQQFYQLGA
GSRSVKGDGDPSSRDLPGKNLRALKMLKHASHKDIKEGSNAVSSQSTEDSNLIIPSNRLL
PGNSQSKLSSTSGFSQFFANRSLKGKDVLPKGPALHEEFDTASNLQNKNESEQASIRMVG
SDALFKPGANSNGVTLREWINLMGSQINKAERIHIFRQIVKLIDIAHSQGTAFQELRPSC
FILLSPNGVKYIGPSVQIDSMYVVNQNTNGKRPSNIDIHAESNLGSKQQKVRCCSHDEST
QFKAGGLLESDIKQLEKRWYTCPEELDHKSLASSNIYSLGVLFFELLCCFESPAARSAAM
MNLQSRILPPNFLCQNPKEVGFCFLMLHPVPSSRPTTREILQSEIIYVAEEVCKIDGVPA
FIEKKDDDPDSDTLLYFLVSLQEEKQNNTSKLLQSIKCLEADIKDVDKKDIFRTSDWVEK
HLNSTDCISRSFSITNMSKEKLMKNFSQLESAYFCMRSQIQLAENDTIGRTDTDLLTSRD
RLSTTEVGPTLKSVDRIEAFFEGICKYARYCKFEEYGTLGNGDLLNSTNVICSLCFDHEE
EYIAAACVSKKIKIFEFASLLDDSADPQYPVAEMSNRSKLSCVSWNNYMKNYLASTDYDG
VVKMWDAITGQEFSQHIEHQKRAWSVDFCQVDPTKFATGSDDCSVKVWNIYERSSVDTIW
NPANICCVQFSAYSSHLLAFGSADYKIYCYDLRHTRIPWCTLSGHEKAVSYVKFLDYGTL
VSASTDNTLKLWDLNRTSLEGLSSNACSLTFKGHTNEKNFVGLSVLDGQIACGSESNEVY
AYHRSLPMPITSYKFGSVDPSFGNEGESNGQFVSSVCWRKKSNMVVAANSTGCIKLLRLV
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggaccagtcaaaggaggacgtagaggcaaatgatgtagctacgaatgtgctacctaaa
acgacggaggatgatatttctgttgaaccatcgatgagaaagtctatatctaccagtctt
gagtttccggagggaccaatttcttctggttcaggtaccaacaacagatatgtaatgtcc
atgaaggatactcagccccatggtacaagttcttactcattgaatagttcaaggctcaca
tttgaaaaattgagtagttacaaaatttccgaaccagcttctcgtagatgctctgataat
aatcgagaaaacaatcagaaaccgcaaattcagtggcaacagttttatcaattaggggct
ggctctagaagtgtgaagggggatggagatccttcatccagggatttgccaggaaagaat
ttgcgagcactgaaaatgctgaagcatgcatcgcacaaagatatcaaagaaggctctaat
gcagtgtcttcccaatcaacagaagactctaacttaatcatcccaagcaatagattactt
ccgggaaatagtcaatcaaaactttcatctacatctggcttttctcagtttttcgctaac
cgatctcttaaaggcaaagatgttttaccaaaaggccctgcgcttcatgaagaatttgat
accgcctctaatctgcagaataagaatgagtctgagcaagcttcaatacgaatggtagga
tctgatgcattgtttaagcctggtgctaattctaatggagttacattgagagagtggata
aacttgatgggatcacagattaacaaagctgagaggattcacatattccggcagattgtg
aagttaattgatattgcgcactcccaaggaactgcattccaggaattacggccttcctgt
ttcattttactgtcacctaatggtgttaaatatattggtccatctgttcagatagactcc
atgtatgtcgtgaaccaaaatactaacgggaaaaggccatccaacattgatatacatgct
gaaagtaacttgggctctaagcagcagaaggttcgttgttgttctcatgatgaaagcacg
caatttaaggcagggggtctgctggagtctgacattaaacagttggaaaagaggtggtac
acttgtccggaagaactcgatcacaaaagccttgcatcatctaatatctacagtctcggg
gttcttttctttgagttgctgtgctgttttgaatcgccagcggcacgttctgcagcgatg
atgaatttgcaaagtcgcattcttcctccaaattttctttgtcaaaatcctaaggaagtt
ggcttttgctttttgatgcttcatcctgtaccttcttctcgccctacaacaagggaaatc
ctgcagtctgaaataatatatgtagctgaagaagtatgtaaaatagatggtgtcccagca
tttattgagaagaaggatgatgaccctgactcagacacgttgctctatttcctagtttca
ctgcaggaggaaaagcagaataatacctccaagttattacaaagtataaagtgcttagaa
gctgatatcaaggacgtcgataaaaaagatatctttagaacttcagattgggtggagaaa
catcttaactcgactgactgtatttctagatcgttttctattacaaatatgagcaaagaa
aagctaatgaaaaatttttctcagcttgaaagtgcttacttctgcatgagatcccaaatc
caacttgcagaaaatgatacaataggtcgaacagacacagatttgttgacgagtcgtgac
aggttgtcaacaacagaggtggggcctactctaaaatctgttgatcgtattgaagccttc
tttgaaggtatttgtaaatatgctcgctactgcaagtttgaggaatatgggacattagga
aatggtgatcttcttaactctacaaatgtgatctgctccctctgttttgatcatgaagag
gaatatatagctgcagcttgtgtctcaaaaaaaatcaaaatctttgaatttgcttcactt
ttggatgactctgcggatcctcaatatcctgtggctgagatgtcaaacagatctaagctt
agctgtgtttcctggaataattatatgaagaattatctggcttcaactgattatgatggc
gtagtcaagatgtgggatgcaatcacaggtcaagaattctcccaacatatagagcaccag
aagagggcttggtctgttgatttttgtcaagtggatccaacaaagtttgccactggaagt
gatgattgctcagtaaaagtgtggaatatctatgagcggagttctgtggatacaatctgg
aatcctgccaacatatgctgtgtgcagttttctgcttactcctctcatctgttggctttc
ggatctgctgattacaaaatctactgctatgatcttcgccatactaggattccatggtgc
acattatctggacatgagaaggctgttagctatgtaaaattcttagattatggtaccctg
gtttctgcatccacagataacacgctaaagctatgggacctaaatagaacaagtttggaa
ggattgtcttcaaatgcttgcagcttgactttcaagggacataccaatgagaagaacttt
gtgggattatcagttttagatgggcaaattgcatgtggttccgaatctaatgaggtatat
gcttatcatagatctctaccaatgccaattacttcttataaatttggatctgttgatccg
agctttggcaatgaaggtgagagtaatgggcaatttgtttcaagtgtttgctggagaaaa
aaatctaatatggttgttgcggcaaactcaactggatgtataaagctgttacgtttggta
tga
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