Lycium barbarum (goji berry): 132632484
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Entry
132632484 CDS
T09483
Name
(RefSeq) elongator complex protein 3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbb03016
]
132632484
Enzymes [BR:
lbb01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
132632484
Transfer RNA biogenesis [BR:
lbb03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
132632484
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Gene cluster
GFIT
Motif
Pfam:
ELP3_N
Radical_SAM_C
Radical_SAM
Acetyltransf_7
Acetyltransf_1
Acetyltransf_10
FR47
Motif
Other DBs
NCBI-GeneID:
132632484
NCBI-ProteinID:
XP_060204427
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Position
3:complement(129776053..129780679)
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AA seq
563 aa
AA seq
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MAAAVVADTRKLPRPGRGGVVSLGLTEEESRVRAITEIVNNMVELSRKGKDVDLNSLKSA
ACRKYGLSRAPKLVEMIAALPDSERESLLPKLRAKPVRTASGIAVVAVMSKPHRCPHIAT
TGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARGRIDQLKRLGHSVDK
VEFILMGGTFMSLPAEYRDYFIRNLHDALSGHTSANVEEAVAYSEHGATKCIGMTIETRP
DYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAH
MMPDLPNVGVERDLESFKEFFESPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQ
LVDIVARILSMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTR
EAGIQDIHNKIRPEEVELVRRDYTANEGWETFLSYEDTRQDILVGLLRLRRCGRNVTCPE
LKGRCSIVRELHVYGTAVPVHGRDTDKLQHQGYGTLLMEEAERIAQREHRSTKIAVISGV
GTRHYYRKLGYVLEGPYMVKSLV
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggtagtagcggatacccgaaagcttccccggccgggtcggggcggagta
gtatccctcggcttaacagaagaagaatccagagttcgtgctataacagagatcgtcaac
aacatggttgaactctcacgtaaaggcaaagatgttgacctaaattcccttaaatcagca
gcttgtcgcaaatacgggctttctagggcacctaaattggtagagatgattgctgcttta
cctgactcggaacgtgaatcactgcttcctaaactccgagccaagcctgtacgtacagct
tcgggtatagctgttgttgctgttatgtctaagcctcatcggtgtccgcatatagctacg
acggggaatatttgtgtgtattgtcctggtggacctgattctgattttgagtatagtaca
cagtcgtatactggatatgaacctactagtatgcgggctattcgagctagatacaaccct
tatgtacaagctcgaggccggattgatcaacttaagagattgggccacagtgttgacaag
gttgaattcatcttgatgggaggcacattcatgtcattgccagcagagtaccgtgattac
ttcatacggaatcttcatgatgctttatctggacatacttctgccaacgttgaagaggct
gttgcatactctgaacatggggcgacaaagtgcattgggatgacaattgaaacgaggcca
gactactgccttggacctcatctgaggcagatgctttcttatggttgtacgcggctagaa
attggagtccagagcacatatgaggacgttgctcgtgacaccaatagaggccacactgta
gcagctgtggctgattgcttttgtttggcaaaggatgctggcttcaaggtggttgctcat
atgatgcctgaccttccaaatgttggtgttgaaagagatttagagagtttcaaagaattc
tttgaaagtccttcatttagggcagatggacttaaaatttatcccacacttgttattcgt
ggcacgggactttatgaactgtggaaaactggaaggtatagaaattatccaccagagcag
cttgtagacattgtagctaggattctttctatggtgccaccttggacacgtgtttacagg
gtccaacgtgatatccctatgcctctagtgacttctggagttgagaaagggaatctccga
gaattggctttagctcgaatggatgatcttggcttgaaatgccgagatgtccgaacacgt
gaagctgggatccaggacattcacaacaagataaggcctgaagaagttgagcttgttcgc
cgtgattatacagcaaatgaaggatgggagactttcctttcatacgaagatacacgtcag
gatattcttgttggtttgctacggctgcggaggtgtggacggaatgtgacttgcccagaa
ctaaagggaaggtgttcaattgttcgtgagcttcatgtgtatgggactgcagttcctgtt
catggtcgagacacagataaactgcagcaccagggttatggtactctgctgatggaggag
gccgagcgaattgcccagagggagcataggtcgaccaaaattgctgttatctcgggtgtc
ggaacccggcattactacagaaagttaggctatgtacttgaaggtccttacatggtaaaa
agcctcgtgtag
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