| Entry |
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| Name |
(RefSeq) SWI/SNF complex component SNF12 homolog
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| KO |
| K11650 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D |
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| Organism |
lbb Lycium barbarum (goji berry)
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| Pathway |
| lbb03082 | ATP-dependent chromatin remodeling |
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| Brite |
KEGG Orthology (KO) [BR:lbb00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132632513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:lbb03021]
132632513
03036 Chromosome and associated proteins [BR:lbb03036]
132632513
Transcription machinery [BR:lbb03021]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132632513
Chromosome and associated proteins [BR:lbb03036]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132632513
PBAF complex
132632513
GBAF(ncBAF) complex
132632513
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
3:130232722..130235494
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| AA seq |
523 aa
MNNNNPVKNISLANLVSQSMPINHNQPPPPHHFSQSPAQRGLHHPGHFQLSESQTQRSNA
QFQSQAQAFSHYITSGVNTNAGGVSSTANSTPNTASGGGNRKVLHRPPSRTGGSSSHGQA
TASPLKTIELTPAVRRKKRKVSDKLIPDKVAMVLPESELYSNLLELEARVDATLFRKKID
MLESLKNSPRIQKTLRIYVFNTFANQTPDSVEPASWSLKILGRILGGGPDPSRSEMEQKS
AVSYPKFSAFFKKITVYLDQNLYPDNHVILWDSSRSPALHEGYEIKRKGDKEFTAIIRLE
MNYVPEKFKLSPALQEVLGIEVETRARVLAALWYYVKIRKLQISDDTSSFTCDAPLKKVF
GEEKLKFAQVSQKITQHLTAPQPIHLEHRIKLSGNSPAGNTCYDVLVDVPLTLQKEMSSF
LSSLEKNKEIDAYDETISNAIKKIHEHQRRRAFFLGFSHSPADFINALVASQARDLKLVS
DDSTRVSEMEKRSEFYNQPWTEDAVIHYLNRKQVSGTDHSARK |
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| NT seq |
1572 nt +upstreamnt +downstreamnt
atgaataacaacaatccagttaagaacatcagtttagcaaacttagtttctcaatctatg
cccataaaccacaatcaaccaccaccaccacatcacttctctcaatcaccagcacaacgt
ggtttacaccaccctggccattttcaattatccgaatcacaaacccaacgttctaatgct
caattccaaagccaagctcaagcctttagccattacatcacttcaggtgttaacaccaat
gctggtggtgtctcatcaaccgctaattctacacccaacacagcctctggtggtggtaat
agaaaagtgctgcatcgaccgccttctcgaaccggtggttcatctagccatggtcaagct
actgcttcacctttaaagaccatagaactaaccccggctgtgagaaggaaaaagcgtaaa
gtttctgataagcttatacctgataaagtggctatggtgttgcccgagtcagaactttac
tctaatttgcttgaactcgaggctcgtgtagatgctactctttttagaaagaagattgat
atgttggaatcccttaagaattctccgcgtatccagaaaaccctgagaatttatgtgttc
aatacttttgctaatcagacaccagatagtgttgagccagcttcatggtctcttaagatt
cttgggaggattttggggggtgggccggatccttctaggtcggaaatggagcagaaatcg
gccgtttcttacccaaagttttcagctttcttcaagaaaattactgtttacttggatcag
aatctatatcctgataaccatgtaatcttgtgggatagttctcgatcaccagcgcttcat
gagggttatgagattaagaggaaaggggataaggagtttactgctatcatcaggctggaa
atgaattatgtgcctgagaaatttaaactttcaccagctttgcaagaggttcttggtatt
gaggttgagacacgagctagagttttagctgctttatggtactatgtaaaaattaggaag
ctacagatatctgatgacacctcctcgttcacttgtgatgctcctctaaagaaggttttt
ggagaagaaaagctgaaatttgcccaggtttcccaaaagattactcaacatttaactgcc
cctcaacctattcatttggagcacaggattaagctatctggaaatagcccagctgggaac
acttgttatgatgtactggttgatgttcccttgacattgcagaaggaaatgtcctctttc
ttatctagtttagagaagaacaaggaaattgatgcatatgatgaaactatttccaacgct
ataaagaaaatccatgaacatcaaagaaggcgagctttctttctgggatttagtcattcg
cctgccgattttattaatgcgttagttgcatctcaagccagggatcttaagcttgtttct
gatgattccacccgtgtttcagaaatggagaaacgttctgaattctacaatcagccttgg
actgaagatgccgtcattcactacttgaaccgcaaacaggtttctggtactgaccattct
gcaagaaaatag |
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