Lycium barbarum (goji berry): 132632513
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Entry
132632513 CDS
T09483
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132632513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbb03021
]
132632513
03036 Chromosome and associated proteins [BR:
lbb03036
]
132632513
Transcription machinery [BR:
lbb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132632513
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132632513
PBAF complex
132632513
GBAF(ncBAF) complex
132632513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Mesothelin
Motif
Other DBs
NCBI-GeneID:
132632513
NCBI-ProteinID:
XP_060204456
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All DBs
Position
3:130232722..130235494
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AA seq
523 aa
AA seq
DB search
MNNNNPVKNISLANLVSQSMPINHNQPPPPHHFSQSPAQRGLHHPGHFQLSESQTQRSNA
QFQSQAQAFSHYITSGVNTNAGGVSSTANSTPNTASGGGNRKVLHRPPSRTGGSSSHGQA
TASPLKTIELTPAVRRKKRKVSDKLIPDKVAMVLPESELYSNLLELEARVDATLFRKKID
MLESLKNSPRIQKTLRIYVFNTFANQTPDSVEPASWSLKILGRILGGGPDPSRSEMEQKS
AVSYPKFSAFFKKITVYLDQNLYPDNHVILWDSSRSPALHEGYEIKRKGDKEFTAIIRLE
MNYVPEKFKLSPALQEVLGIEVETRARVLAALWYYVKIRKLQISDDTSSFTCDAPLKKVF
GEEKLKFAQVSQKITQHLTAPQPIHLEHRIKLSGNSPAGNTCYDVLVDVPLTLQKEMSSF
LSSLEKNKEIDAYDETISNAIKKIHEHQRRRAFFLGFSHSPADFINALVASQARDLKLVS
DDSTRVSEMEKRSEFYNQPWTEDAVIHYLNRKQVSGTDHSARK
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaacaatccagttaagaacatcagtttagcaaacttagtttctcaatctatg
cccataaaccacaatcaaccaccaccaccacatcacttctctcaatcaccagcacaacgt
ggtttacaccaccctggccattttcaattatccgaatcacaaacccaacgttctaatgct
caattccaaagccaagctcaagcctttagccattacatcacttcaggtgttaacaccaat
gctggtggtgtctcatcaaccgctaattctacacccaacacagcctctggtggtggtaat
agaaaagtgctgcatcgaccgccttctcgaaccggtggttcatctagccatggtcaagct
actgcttcacctttaaagaccatagaactaaccccggctgtgagaaggaaaaagcgtaaa
gtttctgataagcttatacctgataaagtggctatggtgttgcccgagtcagaactttac
tctaatttgcttgaactcgaggctcgtgtagatgctactctttttagaaagaagattgat
atgttggaatcccttaagaattctccgcgtatccagaaaaccctgagaatttatgtgttc
aatacttttgctaatcagacaccagatagtgttgagccagcttcatggtctcttaagatt
cttgggaggattttggggggtgggccggatccttctaggtcggaaatggagcagaaatcg
gccgtttcttacccaaagttttcagctttcttcaagaaaattactgtttacttggatcag
aatctatatcctgataaccatgtaatcttgtgggatagttctcgatcaccagcgcttcat
gagggttatgagattaagaggaaaggggataaggagtttactgctatcatcaggctggaa
atgaattatgtgcctgagaaatttaaactttcaccagctttgcaagaggttcttggtatt
gaggttgagacacgagctagagttttagctgctttatggtactatgtaaaaattaggaag
ctacagatatctgatgacacctcctcgttcacttgtgatgctcctctaaagaaggttttt
ggagaagaaaagctgaaatttgcccaggtttcccaaaagattactcaacatttaactgcc
cctcaacctattcatttggagcacaggattaagctatctggaaatagcccagctgggaac
acttgttatgatgtactggttgatgttcccttgacattgcagaaggaaatgtcctctttc
ttatctagtttagagaagaacaaggaaattgatgcatatgatgaaactatttccaacgct
ataaagaaaatccatgaacatcaaagaaggcgagctttctttctgggatttagtcattcg
cctgccgattttattaatgcgttagttgcatctcaagccagggatcttaagcttgtttct
gatgattccacccgtgtttcagaaatggagaaacgttctgaattctacaatcagccttgg
actgaagatgccgtcattcactacttgaaccgcaaacaggtttctggtactgaccattct
gcaagaaaatag
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