Lycium barbarum (goji berry): 132632550
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Entry
132632550 CDS
T09483
Name
(RefSeq) protein argonaute 4B-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132632550
03036 Chromosome and associated proteins [BR:
lbb03036
]
132632550
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
132632550
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
132632550
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
132632550
microRNA pathway
RISC loading complex
132632550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
132632550
NCBI-ProteinID:
XP_060204514
LinkDB
All DBs
Position
3:complement(130925094..130930188)
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AA seq
890 aa
AA seq
DB search
MASMELLPNLPPPPQEIPPGVVPMKVEPRKGCGSVRERLRPNFNQMNGPRPGVKGKKIPL
LTNYFRVCFQGGISQLYSYSVNVYYENGDPVTRSNLIRKVIHKLWEIHSPELEGQAFASD
GQQRLFTTSPLPQNKQDFTVVLDSATSKRCKTDGNLSNGESNEGDQKRQKIISRYQTFKV
QIKFVSDIPFQSMLDGPRGVKSGNNEVLFALDTILQHSNTKRNCLLLRQSYFPNEMKNFM
DLTGGILGCRGFHSSFQSVQGGLFFNLDVSTTAIVQPGPLVNFLMANQNVDNPFKIDWTK
ANILKNLRIKLSHSNREHKITGLSNRRCKEEKFLLQLRGSDNHNVQTVEVTVYDYFVRRL
GIELNYSSNLPCINVGSQLHPQFIPVELCSLVSLQRYKKELSVHQRSLLVNKSSQKPMEL
MKHLNEELKANNYDTDPMLRTCGISINKCFTEVGGRILSPPQLRVGNKQDLAPRFSRWSF
NDKIFVEPKGIEFWAVVNFSTGYDVRAFCIGMTKLGATKGMNIHPPEFVFEENAKHKKKP
GSVQVKKMFEQIMSKFPKDPPRFLFCFLPKKFSNLYGPWKKRCLMNFGIRNQCIAKNRAD
ETYLASVILKINAKVGGLNSMLSAELSQTIPLVSKVPTMILAMGVTHAPSSRSDLPSVAA
VVSSRQWPMISCYRASICTQPPKTETIHSLFRPVSDSEDTGIIRELLMDFYASSGNRRPE
QIIVFRHGLSESQFKQIISEMEEIIKACKFLDETWSPKFALIVAQRRHHNKLFQANSSDN
IPPGTVVDTKICHPLYNNNFYMCAHAARVGTSRPIHYFVLLDEIGFSSDNVQELVHCLCY
VSQRCTSAIYEVAPIRYARLASAQMLEIMKTEGPQLPKLHKNVCNTMFFC
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctatggagttattgccaaacttgccaccacctccccaagaaattcccccaggt
gtggttcccatgaaagttgaaccgcggaaaggatgtggatcagttagggagagattgagg
ccaaattttaaccagatgaacggacctcgtccaggggtcaagggaaagaagatacctctg
ctgacaaattattttagagtatgctttcaaggcggcataagccaactctattcatacagt
gttaacgtctactatgaaaatggggaccccgtcactaggagcaacttaattagaaaagtg
attcataaactctgggagatacacagccctgagttagaaggacaagcatttgcttctgat
gggcaacaacgcttattcacaactagtcctctaccgcagaacaagcaagatttcacagtc
gttcttgattctgcaacatcaaaaaggtgcaagacagatggtaaccttagcaatggagaa
tcaaatgaaggtgatcaaaagaggcagaagatcatatcccgataccaaacgttcaaagtc
cagataaagtttgtctccgacatcccctttcagtccatgcttgatgggccgcgtggagta
aaatcaggaaataatgaagttctgtttgcattagacaccattttgcaacactctaataca
aaaaggaattgccttctgctccgccaatcgtacttcccaaatgagatgaaaaacttcatg
gacttgactggtggtatccttggatgccgaggtttccattcaagtttccaatctgttcaa
ggtggattattttttaatcttgatgtatctactacagcaattgtacagccaggtccacta
gttaactttctaatggccaaccaaaatgtggataaccccttcaaaatcgactggactaag
gcaaatatcttgaaaaatctcagaattaagctatcacactccaatagagaacacaaaatc
actggacttagcaacaggcgatgtaaagaggagaagtttcttctgcaactgaggggatcc
gataatcataatgtccagactgttgaggtgactgtttatgattattttgttaggagactc
ggaatagaactcaattattcatcaaacttgccatgcatcaatgtggggagtcagctccat
ccccagttcattcctgttgagctctgttcattggtttcgttacaacgatacaaaaaagaa
ttatcggtacaccaaagatccttattagtgaacaagtccagccaaaagccgatggaactc
atgaaacatttaaatgaggaacttaaagccaacaactatgacacagaccccatgttgcgc
acttgtggaatctcaattaataaatgttttactgaagtaggaggaagaattctatctcct
ccacagttgagagtgggaaacaagcaagatctcgctccaagattttcgcgctggagcttt
aatgacaagatatttgtagagccaaaaggcattgaattttgggctgtggtgaacttctct
actggttatgatgtacgtgctttctgcattggaatgacgaaattgggtgcaacaaaggga
atgaacattcatcccccagaatttgtgttcgaagagaatgctaagcataagaagaaaccg
ggttctgttcaagtgaagaagatgtttgaacaaataatgtcgaaatttcccaaggatcct
cctcgattccttttctgctttcttcctaagaagttctctaacttatatggtccatggaag
aaaaggtgcctaatgaacttcggaattcgtaaccagtgcattgcaaagaacagagctgat
gaaacttatcttgctagtgttatcttaaaaattaatgcaaaagttggtggtctgaattct
atgttatcagctgaactttcacagactattcccttggtttctaaagttcctacaatgatc
ttagcaatgggtgttacacatgccccgtcttcacggtcagatttaccctccgttgctgca
gtggtcagttctagacagtggccgatgatttcttgctatagagcatctatttgcacccaa
ccaccaaagaccgagactatacattcactctttagaccagtttcagatagcgaggacaca
ggcataatcagggagctgctgatggatttttatgctagctccgggaacaggaggcctgaa
cagatcattgtattcagacacggtttaagtgaatctcaattcaagcaaattatcagcgaa
atggaggaaattattaaggcctgcaagttcctggatgagacttggtctcctaaattcgct
ctgattgttgcacaaagaagacaccacaataagttattccaagctaattccagtgacaat
attcctcctggcacagtcgtcgatactaaaatttgtcaccctctgtataataacaacttc
tacatgtgtgcacatgcagcaagagttgggactagcaggccaattcactactttgttctg
ttggatgagattggcttctcgtccgataatgtgcaggaactagtccattgtttatgctat
gtgtctcagagatgcaccagtgctatatatgaagtggctccgattcgttatgctcgtttg
gcttcggctcagatgttagaaattatgaagactgaggggcctcagctgccaaaattgcac
aaaaatgtttgcaatacaatgttcttctgctga
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