Lycium barbarum (goji berry): 132632622
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Entry
132632622 CDS
T09483
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132632622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132632622
03009 Ribosome biogenesis [BR:
lbb03009
]
132632622
04131 Membrane trafficking [BR:
lbb04131
]
132632622
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lbb04147
]
132632622
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
132632622
Ribosome biogenesis [BR:
lbb03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
132632622
Membrane trafficking [BR:
lbb04131
]
SNARE
SNARE associated proteins
Others
132632622
Autophagy
Aggrephagy
Other aggrephagy associated proteins
132632622
Exosome [BR:
lbb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132632622
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_33
AAA_16
AAA_2
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
AAA_18
AAA_28
Mg_chelatase
nSTAND3
ATPase_2
nSTAND_NTPase5
Viral_helicase1
Parvo_NS1
AAA_lid_PRS2_C
ABC_tran
AAA_7
NB-ARC
NACHT
TsaE
IstB_IS21
Vps4_C
DUF815
RCF1-5-like_lid
Zot
PEX6_4th
Motif
Other DBs
NCBI-GeneID:
132632622
NCBI-ProteinID:
XP_060204599
LinkDB
All DBs
Position
3:complement(132561877..132566559)
Genome browser
AA seq
810 aa
AA seq
DB search
MAHPSSSTSDPKNNKKDFSTAILERKKSPNRLIVDEALNDDNSVVSMHPNKMEELQLFRG
DTVLLKGKKRKDTVCVVLADEQCEEPKIRLNKVVRANLRIRLGDVVSVHQCPDVKYAKRV
HILPIDDTVEGMTGNLFDAYLKPYFLESYRPVRKGDLFAVRGGMRSVEFKVVETEPGEYC
VVAPDTEIFCEGEPIKREDEERLNEVGYDDVGGMRKQMAQIRELVELPLRHPQLFKSIGV
KPPKGILLYGPPGSGKTLIGRAVANETGAFFFLINGPEIMSKLAGESEGNLRKAFEEAEK
NAPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRSHVIVMGATNRPNSIDP
ALRRFGRFDREIDIGVPDEVGRLEILRIHTKNMKLDDNVDLERVAKDTHGYVGSDLAALC
TEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQTALGASNPSALRETVVEVPNTS
WEDIGGLENIKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC
QANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGG
AADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEASRLQ
IFKACLRKSPVSKDVDLAALARYTHGFSGADITEICQRACKYAIRENIEKDIERERKRGE
NPEAMDEDDTDDVAEIKAAHFEESMKYARRSVSDADIRKYQLFAQTLQQSRGLGTEFKFA
EHAANATETGATSDPFASVNAAGDDDDLYS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggcacacccaagttcttccacttcagacccgaaaaacaataaaaaagatttttcgact
gcaattttggagaggaagaaatcccctaaccgccttattgttgatgaggccttaaatgat
gacaattcagttgtgtctatgcaccctaataaaatggaagagctgcaactgtttcgagga
gatactgtcttgctaaagggtaaaaaacgaaaggacactgtttgtgttgtccttgcagat
gaacaatgtgaagaacctaagatcagattgaacaaagtcgttcgagctaatcttagaatt
cgtcttggggatgttgtgtctgtacaccagtgtcctgatgttaagtatgcgaagcgtgtt
cacattcttccaattgatgacacagttgaggggatgactggcaacctgtttgatgcgtac
ttgaagccatacttcttggagtcttaccgccctgtcaggaagggcgatctctttgcagtc
agaggtggtatgcgtagtgttgaatttaaagtggttgagacggagcccggagaatattgt
gttgttgcacctgatacagagatcttttgcgagggagaaccaatcaagcgtgaagatgag
gagagactaaatgaagttggatatgatgatgttggtggtatgaggaagcaaatggctcag
attcgtgagctggttgaactccctctaaggcatccacagttgttcaagtcaattggtgtg
aaaccaccaaaaggtattcttctgtatggtcctcctggatcggggaaaaccttgattggc
agagctgtggcaaatgagactggtgcatttttctttttaattaatgggcctgaaataatg
tccaaattggctggtgagagtgagggtaacttgaggaaggcatttgaggaagctgaaaag
aacgcaccatctatcatatttattgatgagttagactcaattgctccaaagagagaaaag
acacacggcgaagttgagcggcgcatagtttcccaacttctgacattaatggatgggctc
aagtctcgatctcatgtgattgtcatgggagccaccaacagaccaaacagtattgatcct
gctctccggagatttgggagatttgaccgagagattgacatcggcgtaccagatgaagta
gggcggctggagatcctacggattcatactaaaaatatgaagctcgatgataatgttgat
ctagagagagttgcaaaagacacacatggttatgtcggatctgatcttgctgccttgtgc
accgaggctgcgttgcagtgtatcagggagaaaatggatgttattgacttggaggacgag
accattgatgctgaagtgttgaattcaatggctgtgactaatgagcattttcaaactgct
ctgggtgcttcaaatccatcagctttacgagaaacggttgtggaggtacccaacacctct
tgggaggatattggagggctggaaaatatcaagcgggaactccaagagactgttcagtat
ccggttgagcatcctgagaagtttgagaagtttggcatgtcaccctctaaaggggttctt
ttctatggacctcctggttgtggcaaaactttacttgccaaagctattgcaaacgagtgt
caggctaacttcataagtgtgaaaggaccagagttgcttacaatgtggtttggagaaagt
gaagcaaatgttcgggaaatatttgacaaggcacgacagtctgctccgtgtgtactgttc
tttgatgaactcgattccattgctacgcagagggggaattctgtgggagatgctggtggt
gctgctgatagagtactcaatcaattgttgacagagatggatggtatgacggcaaagaaa
acagtattcatcattggggcaacaaataggccagacattattgaccctgcattgctcaga
ccagggcgtctagaccaattaatttacattcccctcccagatgaagcttcccgtcttcaa
atcttcaaagcatgtttgcggaagtcccccgtctctaaggacgtggatctggcagctcta
gcacggtatacacatggttttagtggtgcagacataactgagatttgtcaacgagcatgc
aaatacgccattagagaaaacattgaaaaggatattgagagagagaggaagagaggagaa
aaccctgaagcaatggatgaagatgatactgatgacgtggctgaaataaaggctgcacac
tttgaggagtccatgaaatatgctagacgaagtgtgagtgatgctgacattaggaagtac
cagctttttgctcaaacattacagcaatcacggggacttggaactgaattcaaattcgca
gagcacgcagctaatgctacagaaaccggggcaacatccgacccattcgcttctgttaat
gctgccggagacgatgacgacttgtatagttaa
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