Lycium barbarum (goji berry): 132632626
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Entry
132632626 CDS
T09483
Name
(RefSeq) cleavage stimulating factor 64 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132632626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132632626
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
132632626
U7-dependent histone pre-mRNA processing factors
132632626
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
RRM_7
partial_CstF
RRM_10
Motif
Other DBs
NCBI-GeneID:
132632626
NCBI-ProteinID:
XP_060204605
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All DBs
Position
3:132708605..132715625
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AA seq
509 aa
AA seq
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MATSDSQRRCVFVGNIPYDATEEQLIQICEEVGPVVSFRLVIDRETGKPKGYGFCEYKDE
ETALSARRNLQGYEINGRQLRVDFAENDKNSDRNREQGRGGPGMVANADPKKHIGGPAVP
VDSALQQPLGMSVAMTAAAVMSGALGAAQSGSSFGQSGVDPLTLHMSKLSRSQLNDVMSE
FKAMCSQNKEQTRQLLLAIPNLSKALFQAQLILGMVTQPMLQTPNIRQAAAPQLQPLLLD
SQRSQQQATQSLPGLPPLPPNLLPQARPQVQLAQPGQNQVLHSQFPSPSRIGPPMQPQVN
VSVNPPIQVGTSSAIKQQMQPPFSQQAGPVASTSFTYNNQLGTTNTSYHRPPSMRPQLLE
QGFQGSPSAISGVLDNMNKDSRRPQAPNNSSLITRPAYPSGLPEEKRGASNNLDLLSRPL
KQARLNDGISYALPVASVSTSLPGPSTQVSVAAEVSNPDKQASQVQLPSDVESALLQQVL
SLTPEQLSSLPPDQQQQVIQLQQMLQQPT
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggccacttctgattctcagcgtcgctgcgtctttgttgggaatataccatatgatgct
actgaggaacaactaattcaaatctgtgaggaagttggaccagttgtttccttcagatta
gtgattgatagagaaactgggaaaccaaaaggttatggattctgcgaatacaaggatgaa
gagactgccttgagtgctcgtcgcaaccttcaggggtacgagataaatggtcggcagcta
agagttgattttgctgaaaatgataagaattctgacagaaatcgtgaacagggtcgcggt
ggacctggcatggtcgcgaatgctgatcccaaaaagcacatagggggaccagctgtcccc
gtggattctgcacttcagcaaccattaggcatgtcggtagctatgactgctgcagccgtt
atgtcaggagctcttggagctgctcagagtggcagctcattcggtcagtctggagtagat
cctttaacactacatatgtccaaattgtctaggagccaactgaatgatgttatgtctgag
tttaaggcgatgtgttcacaaaacaaggaacagacacgccaactgctgctagcaattcca
aatttgtcaaaagctctttttcaggcacaactaatactgggaatggtaacccaaccaatg
ttgcagacgccaaatattcgacaagctgctgctcctcagctgcagccattgttactagat
agtcagcgaagtcaacaacaagcaactcagtctcttcctgggttacccccacttccccca
aatttgctccctcaggcacggcctcaggttcaactggcgcaaccagggcagaaccaagtt
ttgcacagtcagtttccctcgccttctagaatcggtccaccaatgcaaccccaggtcaat
gtgtcagttaacccaccaattcaggtgggaacttcctctgctataaagcagcaaatgcag
ccgcctttctcacaacaagctgggcctgttgcatctacgagttttacatataataatcag
ctggggacaacaaatacaagctatcatcgtcctccgtcaatgcgtccccaattattggaa
caaggttttcagggaagcccttcagccatttctggtgtcttggataatatgaataaagac
tctcgacgaccccaggctcctaataattcatctttgattaccagaccagcttacccttca
ggtttgcctgaggagaagagaggggcatctaataatctagatcttctgagtcggccattg
aaacaggcaaggctaaatgatggaataagttatgccttgcctgttgcaagtgtatctacg
tccctgccaggaccctcgactcaagtttcagttgcagcggaagtgtcaaaccctgataaa
caagctagtcaggtgcagcttccctcggacgtagagtctgccttgctgcaacaagtactg
agtctcactcctgaacagttaagttcactgccaccagatcagcagcagcaggtcattcag
ctccaacagatgcttcagcagccaacatag
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