KEGG   Lycium barbarum (goji berry): 132632655
Entry
132632655         CDS       T09483                                 
Name
(RefSeq) serine/threonine-protein kinase ATM isoform X1
  KO
K04728  serine-protein kinase ATM [EC:2.7.11.1]
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    132632655
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:lbb01001]
    132632655
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lbb03032]
    132632655
   03036 Chromosome and associated proteins [BR:lbb03036]
    132632655
   03400 DNA repair and recombination proteins [BR:lbb03400]
    132632655
Enzymes [BR:lbb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     132632655
Protein kinases [BR:lbb01001]
 Serine/threonine kinases: Other
  PIKK family [OT]
   132632655
DNA replication proteins [BR:lbb03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    132632655
Chromosome and associated proteins [BR:lbb03036]
 Eukaryotic type
  Meiosis-specific proteins
   DSB formation-related proteins
    132632655
DNA repair and recombination proteins [BR:lbb03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    132632655
SSDB
Motif
Pfam: PI3_PI4_kinase FATC TAN
Other DBs
NCBI-GeneID: 132632655
NCBI-ProteinID: XP_060204653
LinkDB
Position
3:133159133..133218525
AA seq 3014 aa
MANIVTSRDIQDIVTKLSSDKAKSREEGIKLLNAWLEEGQRSVEFCRYIGEKTAKLKPGE
IPHSETWPFLVTLLTKCVSLEISGSKKRLPKLNFAKTLRTVVQRAEDAKFSGKDMPLLPV
AKLLFNHVWDVLKDTPSFQSEYGTILRHLLAVRSYRFHMRKRVYCCLVLLYIEKVETSLK
EKSDGQINPREEVFRCITTLHSLLENPPGDFPDTLQEDIVKGFIGIFSYVRDEGKISRKL
IECINIYLLKDGPNLGSKSLEIHDALQHFVFRCWLTTHDRGLKDSLVLYAKLQLNLTRDL
ADGSSLLEQLQDVLGKELDQISSCTINLPWKDTTRDDKCGSLTSSQCGLMELAALVFCRA
CVSTPIASSSEKRLRREHVVVQIRERLSRGKWPWHAAFCYLIHNYYGRIKKDLMIYWFEG
ICASFERIINDANMEHSYGGLLWTLRSLQGLSLMLLFPVPALQTSSELSSTVNGVETGWR
MIWNCVIGGLPTFSTFTAVVDAALMLLRNLILTDTANAYLVPQDLWDLRLVKRVPSISVL
CFISCYFSRKGYQGDLRDTLYLRQNLLRAVLAFPFWKECSMLNKQLVAILPTAVYALCTG
GTPLDKGLSPSHYVPETVNDVKVEDHTHESVHDLYECSVEVLAKIGQESDLEDIQSPRCQ
SIRLPRQIRDPLCHEVENHILEIIKDEEHERMLLSDVIFLCAILSNFMYCSYSTRIGEET
VRCLAALSQYVSKLLDRASSILEKSYDDLVCALLGSRSIFDAIGTIHVSFESFLCSPLFK
EMQTDNSIDVLAAVIQSVERLLNVLAKLYEGSLSCGSNIHSNRGDLDSSASISSQDSRPV
NSRTSMIMDMELDVNTGSKDTDAVNIGGKATANILASSLNQRMEVISIITKFFSALPFHT
WDVMFAFMEKESDPRVLQLIIHGLCQHPHWSSSRKFLNLVTSLNDFLDIQANLKAQSLNV
LAAICSLLESLLSCDGAAKYKKRTLSWEKLSEEGLISLGDLVNKIADNDLFDWVGRTKLI
DCICNFILVDPQIGQSMIEKLLLMLRDPDYRVRLCFAQRVGVLFQTWDGHFELFQDICSN
FGTKLVTCSREKLVMAKEVLAAGPQPRTILETTIVTLAHLALHSEKIELEAVFMVCAIAA
INPCLRKLVIAALDNLSRELKYTSRSKYMEEFMASILFSWVATGVSLAALLEARDLFVFN
VEPINFIQSCCRWLLPSLILHGDISNMNWIAKVTCEPLAEMIKKHFVDIFSVCIALHCSK
KVGWEKGSVILESSILDVAKISEIERDKLIKTHMVSIVNTIFSLASTAADPVLPLFSKET
IARAIMTVVDGFLEIDDSCKCFGLVDKINIFRPDRVFTFIIEMHYKVAAAGHFRHKSDRL
AGIEVLIDVLGHRVAVPSTASYLLNLIGQCLDLEALLDQCCRMISSLLKIFKIKQLEGTT
IVLGEQLQFLISKLVVCCIPSESSSKLSAATSSEVLSLLRQLTLDSDPSLHEYIKELEPF
PNLDLFHDIRMFHEELCQNYSPMEHLLILGKRSRYLPPRLLLWSLKALHKKLFEHEAYPS
QKNEENIFEDAYLDSDHKIVHTVWNLVQTCSLSGAGNFGLLVSDFLSRVGIGDPHGVVFH
LPIESKSVHDHNFHLGTGISDELLVAIMRLLKKYLMDDSVKIIDIASQALRGILSTENGQ
RALLSFDSYQRSLIEVHSKGVNVNLVQKLLADLERKLNAEALSLKNSSLWKTDGKTFETW
ICPLVCALIKYCDDMILRLCQDIVLVKSEVAELLFPHVMVNLSCRRDVDVDLCQLISSQV
QENILTEDNKVTKSIQVILDALNELRLCHVMERGTSSNSSKRENSKQYGRPSSYGSKLRT
TPLKAKHQTTTSSVVSMSTLSWEKVYWIPMDYLAVARSAITSGAYFTAVLYVEHWCEENF
NSLTLGTPDFSHVEILPQHIEILLSAVTQINEPDSLYGIIQSHKLASQIITFEHEGNWSK
ALEYYDLQIRSDPVAHGSSYSPENFLHSSGSVVDQMIEKKPYKGLIRSLQQIGSTHLLDV
YCQGLTSQKGKFQHDSEFTELQYEAAWRSGNWDFSLLYGESNVLSIQHGGEHFNENLHSC
LRALKEGGFNEFQIKLKDSKQELLLSICHASEESTKYIYQSIVKLQILYHLGMAWDSRWT
PSFRMLDSVKMPKVLSKPVLPSSAQLSCLDMDWKRTLKQAQLHMNLLEPFVAFRRVLLQI
LNCQNYTVQHLLESAATLRKVSRFSQAASALHEFKFLCAEIREHTNLYWLGRLEEAKLLR
AEGQHQMAINLAKYISQNYQMNENASDVFRLIGKWLAETGTSNSRTILEKYLKHAVTLAE
DSMARGNVSTTKRSQMHFHLAHYADALFRSYEERLNSSEWQAAMRLRKHKTKELEALIKR
LRSSTKGEKTEKTDCSAKIQELHKQLAMDKKEAEKLQEDRDNFLSTALDEYKRCLVIGAK
YDVRVVFRLISLWFGLSIRPIVVDSLLSTISEVQSYKFIPLVYQIASRMGSTKDGQGGQK
FQVALVSLIKRLAIDHPYHTIFQLLALANGDRIKDKQRSRSSFVVDMDKKIAAENLLKEL
SSYHGAVIRQMKQMVEIYIKLAELEMKREDTNKKVNLPREIRSIRALELVPVVTANIPID
PSCQYTEGSFPHFKGLADSVTVMNGINAPKVVECFGSDGNKYRQLAKSGNDDLRQDAVME
QFFGLVNTFLQNHRDSWKRRLGIRTYKVVPFTPSAGVLEWVNGTLPLGEYLIGSNRDGGA
HGRYGAGDWTFMKCRQHMNVESDKRKAFQEVCDNFRPVMHHFFLERFFHPADWFQKRLAY
TRSVAASSMVGYIVGLGDRHSMNILVDQATAEVVHIDLGVAFEQGLMLKTPERVPFRLSR
DIIDGMGITGVEGVFRRCCEETLSVMRTNKEALLTIIEVFIHDPLYKWALSPLKALQRQK
ESDDDLETSLEGSQQDDYEGNKDAARALMRVKQKLDGYEEGEMRSVHGQVQQLIHDAIDP
DRLCHMFPGWGAWL
NT seq 9045 nt   +upstreamnt  +downstreamnt
atggctaatattgtgacgtccagagatattcaggacatcgtcaccaaactctcatcagat
aaagcaaaatcgcgagaagaagggattaagttgttaaatgcgtggttagaagaaggccaa
aggtctgttgagttctgtagatacattggagagaagaccgcgaagcttaaaccaggtgaa
attcctcattcggagacatggccgtttcttgttacattgcttactaaatgtgtgtccctg
gagatatctgggagcaaaaagcgtttgccaaagttgaattttgcaaaaactcttcggact
gttgtccaacgagcagaagatgctaaattttcaggcaaagatatgcctcttctacctgtg
gcaaaattgcttttcaatcatgtctgggatgtcttaaaggatactcctagttttcaatcc
gagtatggaactattttacggcatcttttggcagtgagatcttaccgttttcacatgagg
aagcgggtttactgttgtttggtgcttctatacatagaaaaggtagaaacaagtttaaag
gaaaaaagtgatgggcaaataaatccaagggaggaggtctttcgctgcatcacgacactt
cattctcttcttgaaaatccccctggagattttcctgatacccttcaagaggatattgtc
aagggttttattggaattttttcttatgtaagggatgaagggaaaatttcacgcaagcta
atcgagtgcattaacatatatttgctgaaggatggcccaaatttgggttctaaatctctc
gaaattcatgatgctctgcagcattttgtcttccgatgttggttgacaactcatgatcgt
ggcttaaaggattcacttgttctttatgcgaagctacaactaaatttgacgagagatctt
gctgatgggagctctttactagaacaacttcaggatgtactagggaaggaattagatcaa
ataagcagttgcaccatcaatttaccctggaaagacacaaccagggatgacaaatgtgga
agcttgacaagctctcagtgtggtcttatggagcttgcagcacttgtcttttgccgggca
tgtgtcagcacacctatagcttcatcatctgagaaacgacttagaagggagcatgttgta
gtccagataagggaaagactctcaaggggaaagtggccgtggcatgcagctttctgttac
ctcatccacaattattatggtcgcataaagaaggatctgatgatctattggtttgaaggt
atatgtgcaagttttgagaggataataaatgatgcaaacatggaacatagttatggaggt
ctcctgtggacattgaggagtcttcaaggactttctttgatgctgctgtttcctgttcca
gcactgcaaacatcttcggagttgtcatccacagtgaatggggttgaaacaggttggcgt
atgatatggaactgtgtcattggtggtctgccgacattcagtacttttacagcagttgtg
gatgctgcattaatgctacttagaaacttaatactcactgatacagcgaatgcatatctt
gtgccccaggacctgtgggatcttcgattagttaaacgcgtgccgtcaatatctgttttg
tgcttcatttcatgttacttttccaggaaaggctaccaaggtgatcttagagacacttta
tatttgaggcaaaatcttttgagagctgttttggcttttcctttctggaaggaatgttca
atgttgaataaacagctggttgctatattgccaacagctgtttatgctctctgtactggt
ggtactccattggataaaggactttccccatcacactatgttcctgaaacagtgaatgac
gtgaaggtcgaagatcacacacatgaaagtgtgcatgacctttatgaatgctctgttgaa
gttcttgcaaagattggccaggaatctgatctggaggacattcaatcacctcgttgccaa
agtatacgtcttccccgacagatcagagatccactttgtcacgaagtcgaaaatcacatt
cttgaaattattaaagatgaagaacacgaaaggatgcttctatctgatgtcatcttcctc
tgtgctattttatcgaacttcatgtattgttcatatagtacgaggataggagaagaaact
gtgcgttgccttgccgctctgagtcaatacgtgtcgaagttgttggatcgagcttcttct
atcttagagaagagttatgacgacctagtttgtgctttgttgggttcaaggtcaatattt
gacgcaattggcaccattcatgtgtcctttgaaagttttctatgctccccattgtttaag
gaaatgcaaactgacaacagcatagatgtactagctgcagtaattcaatctgtggagagg
cttctgaacgttcttgctaaactgtatgaaggatcattaagttgtggcagtaatattcat
tcaaataggggcgaccttgactcttctgcttctatttctagtcaagattctcgtccagta
aatagccgtactagtatgatcatggacatggagttggatgtgaacactggttctaaggat
actgatgctgtgaacattgggggaaaagctactgccaatatattggcttcatctctaaat
cagagaatggaagtcatatcgatcatcacaaaattcttttcagctttaccatttcataca
tgggatgtcatgtttgcgttcatggagaaagaaagtgatccaagggtcctgcaattaatc
atacacggtctttgtcaacatcctcattggtcttctagcagaaagttcttaaacttggtt
acatccttaaatgatttcctagacatacaggcaaatcttaaggcccagtctctgaatgtg
ctagctgccatctgcagtttgttggagagtcttttatcctgtgatggtgctgctaagtac
aaaaagaggactctgtcatgggaaaaattgtctgaagagggcttgatttctcttggagac
ctggtgaacaaaattgcagacaacgacctctttgattgggttggccggactaagcttatt
gattgcatttgcaatttcattttagtggatcctcaaattggtcagtctatgattgagaag
ctgttgctgatgcttcgtgatcctgattatcgagttaggttatgctttgctcaacgggtt
ggtgtgcttttccaaacctgggatggtcattttgaactgttccaggacatatgttcaaat
tttggcacaaagcttgtgacttgctccagagagaaactggtgatggcgaaggaggtttta
gctgctggtcctcagcctcgtaccatattagaaacaacaattgtaaccctggctcacctt
gcgctgcacagtgaaaagattgaattggaggctgtttttatggtatgtgctattgctgca
attaacccttgtttgaggaaacttgttattgctgcccttgataatctatcaagggagtta
aagtatacttctaggtcaaagtatatggaagaatttatggcgtcaatcctctttagttgg
gttgctactggtgtaagtttagctgctcttctcgaggcaagagatctgtttgtcttcaat
gtagagcctatcaatttcattcagtcctgctgccgttggcttcttccatctttaatcttg
catggtgacatctctaacatgaattggattgcgaaggttacttgtgagcctcttgctgaa
atgattaagaaacactttgtggatattttctctgtttgtattgcgttacattgcagtaag
aaggttggttgggagaagggatcagttatacttgaaagttcaattctggatgttgccaaa
atatctgaaattgaaagagacaagcttataaagacacacatggtttcaatcgtcaatact
attttctctcttgcttcaacagctgcagaccctgttcttcctttattctccaaggagaca
attgcacgtgcaattatgaccgttgtggatggattcttggagatagatgactcttgtaaa
tgttttggccttgttgacaagattaacatcttccgacctgatcgagtatttacgtttata
atagagatgcattacaaagttgctgcagctggtcatttcaggcacaaatctgataggctt
gctgggattgaagtgcttattgatgtattagggcatcgagttgcagttcctagtactgcc
agttatctcctcaacttgattggtcaatgcttggaccttgaagctttgctggaccagtgt
tgccgaatgatttcttcattgctaaaaattttcaaaatcaagcaattggaaggaaccact
attgtcctaggagaacagcttcagttcttaatctccaagttggtagtgtgttgcattcct
tctgagtctagttccaaactgtcagccgccacatcatctgaagttctgtcactgctccgc
caacttaccttggactctgacccgtctctacatgagtacattaaagaactagagcccttc
cctaacctcgacttatttcatgatatacggatgtttcatgaggaactatgccaaaattac
tcgcctatggagcacttgttaatcttagggaaacgatctcgctaccttcctccaagatta
cttctctggagtctaaaagcattgcacaagaaattgtttgaacatgaagcatacccatca
caaaagaatgaggaaaacatttttgaagatgcatatctggattctgaccacaaaattgtc
catacagtctggaacctggtgcagacatgtagtttgagtggtgctggcaattttggcttg
ctggtctctgattttttatctcgggttggtattggcgatccccatggtgttgtgttccat
cttcctattgagtctaaatctgtacatgatcataacttccaccttggtacgggcatatca
gatgaacttttggtggcaattatgagacttttaaagaaatatttgatggatgactctgtt
aagataattgacatagcatctcaagctttgcgggggatactttcaactgaaaatggtcag
agggctttgctatcatttgattcttatcagagatcccttattgaggttcattccaagggt
gtcaatgttaacctggttcagaaactcctggcagatctagaaaggaagcttaacgctgag
gcactttccctaaagaattcttctttatggaagaccgatggaaaaacgttcgagacatgg
atttgtcctcttgtttgtgcgctgattaaatattgtgatgatatgatcctgagattgtgt
caagatattgtgttggtgaaatctgaagttgcagaactcttgttccctcatgtgatggtc
aatttatcgtgtagaagagacgtggatgttgatctttgtcaacttatctcctcacaggtg
caagagaacattcttaccgaggacaataaggtgaccaaatcaattcaagttatcttagat
gctcttaatgagcttcgattgtgtcacgtgatggaaagaggcacatcctctaattcctct
aagcgagaaaattcaaagcaatatggaagaccttctagctatggatcaaagttacgcacc
acacctctgaaggcaaagcatcagacaaccacttcatctgtagtatcaatgtccacattg
tcatgggaaaaggtttattggattcctatggattatcttgctgttgcaaggtctgcaatt
acttctggtgcttactttactgctgttctttatgtggaacactggtgtgaagagaatttc
aattccctgacattgggcactccagatttttctcatgttgagattctaccacaacacatt
gaaatacttttatctgcagtaacacaaataaacgaaccagacagcctctatggaatcatc
caatcccacaagttggcctctcaaattatcacatttgaacatgagggaaattggagtaaa
gctcttgagtactatgatttacaaattagatctgatccagtggctcacggaagcagttat
tctcctgaaaattttcttcattcatctggttccgtagtagatcagatgatcgaaaagaaa
ccatataagggccttattagatccttgcagcaaattggttctactcatcttttggatgtg
tactgccaaggattgacctctcaaaaaggaaagtttcaacatgattcagagttcacggag
ctacagtatgaagctgcctggcgttctggaaactgggatttctcactactttatggtgaa
tctaatgtcctctcaattcaacatggaggtgagcatttcaatgaaaatctccacagctgt
ttgagagcattaaaagagggaggtttcaatgaattccagataaaattaaaagattccaag
caggagcttttgctatctatctgtcatgcaagtgaggagagcaccaaatacatttatcaa
tctatagtgaagcttcagatactttatcacctcgggatggcatgggattcacgttggact
ccatctttcagaatgctggattctgtgaagatgccaaaggtcttatctaaacctgtactc
ccatcaagtgctcagttatcatgcctagacatggactggaagcgcactttaaagcaagca
cagttacatatgaatttactggaaccatttgtggcatttagaagagttttgcttcagatt
ttaaattgccagaattatactgtacaacatctgctagaatctgcagctactctccgcaag
gtgtctaggttttcacaggctgcttcagctttgcatgaattcaagtttctctgtgcagaa
attagagaacataccaacctttactggcttggacggcttgaagaagctaagcttctgcgt
gctgaaggccaacatcagatggcaatcaatcttgcaaagtatatttcacaaaactaccag
atgaacgaaaatgcatctgatgtgttccggttaattgggaagtggctggctgaaacagga
acaagcaactcaagaactatactagagaaatacttgaagcatgcagtcactcttgctgag
gattccatggcaagaggaaatgtttccaccacaaaacgaagtcaaatgcatttccatctt
gcacactatgctgatgctctatttcgtagttacgaagagagacttaattccagtgaatgg
caggcagcaatgcgtttaagaaagcacaagacaaaggagctggaagcattaattaaacga
ttaagaagttcaacaaagggggaaaagactgaaaagactgactgttccgcaaaaatacaa
gagttgcataagcagctggcaatggacaaaaaagaggctgaaaagttgcaggaagacagg
gacaactttctaagcactgcgcttgatgaatataaacgttgtttagtcattggagctaaa
tatgatgtcagggtggtgtttcgacttatttcgctgtggtttggtctctcaattagacca
attgttgttgatagcttgctcagcacgataagtgaggttcagtcttacaagtttatacca
ctagtatatcaaattgcttcaaggatgggaagcacaaaagatggtcagggaggtcaaaag
ttccaggttgctttggtttctctcattaaaagactggccattgaccatccatatcacacg
atatttcagcttctagctttggcaaatggtgataggatcaaagacaaacaacgtagcaga
agttcttttgtggttgacatggataaaaaaattgctgcagaaaatctgctgaaggagtta
tcttcatatcatggagctgtcatcagacagatgaaacaaatggttgagatctacattaaa
ctagctgaactagaaatgaagagggaggatactaacaaaaaggttaatcttccgagagaa
attcgcagcatccgagcgcttgaacttgttcctgtggtaacagccaatataccaattgac
ccgagttgtcaatacactgaaggctcctttccacactttaaaggattagcagattctgtc
actgtgatgaatggtataaatgctccaaaagttgttgagtgttttggctctgacggcaat
aaataccgacaacttgctaaatccggcaatgatgacctgagacaagatgctgtgatggaa
cagttctttggtttagttaatactttcttacagaaccatcgggacagttggaaaagaagg
ctgggaattcgcacttacaaggttgtaccttttactccgagtgcgggtgttttggaatgg
gtgaatgggactcttccactcggtgaatatcttataggcagcaatagagatggaggtgcc
catggacgctatggagcaggagactggacatttatgaaatgccggcaacacatgaatgtg
gaaagtgacaagcggaaggccttccaggaagtctgtgataacttcaggcctgtcatgcat
cactttttcttggagagattttttcatccagctgactggtttcaaaagagacttgcttat
accagaagtgtggccgcgagttcaatggttggatacattgttgggctaggagatcggcat
tccatgaatatccttgtagatcaagccactgcagaagttgttcacatagatcttggggtt
gcatttgagcagggccttatgctgaaaactcctgaaagggtacccttcaggctgagtagg
gacataatagatggcatgggcataactggggtggaaggggtttttagaagatgctgtgag
gaaaccctgtctgttatgcggacaaacaaagaagcactgttaaccattatcgaggtcttt
atccatgatcccttatacaagtgggctttatcccctctaaaggctttgcaacgtcagaag
gaaagtgatgatgatctggaaaccagtttggaaggctctcaacaagatgactatgagggg
aacaaggatgctgctagagccttgatgcgtgttaaacaaaagttagatggatatgaagaa
ggtgaaatgagaagcgttcatgggcaggttcaacaactcatacatgacgccattgatcct
gatcgtttgtgtcatatgtttcctggatggggagcttggctatga

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