Entry |
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Name |
(RefSeq) pectate lyase-like isoform X1
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KO |
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Organism |
lbb Lycium barbarum (goji berry)
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Pathway |
lbb00040 | Pentose and glucuronate interconversions |
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Brite |
KEGG Orthology (KO) [BR:lbb00001]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
132632671
Enzymes [BR:lbb01000]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
132632671
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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Position |
3:133542761..133547326
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AA seq |
461 aa
MRFTKHNLFLFFLVVVLVVSIEAHIGEYDEIWRKRAQQAKKAARHAYHPNPKIVANHLNN
QVDKAIRGSNSRRRDLHRYSGKCMATNPIDQCWRCDPNWARNRMKLTDCVLGFGRKTTGG
KGGKIYVVKDNSDKDLVNPKPGTLRHAVIQPEPLWIIFAKNMVIRLSEELIMTSNKTIDA
RGRQVHIAHGGGLMLQFIHNVIISNLHIHDVKAGSGGLIRDSVKHYGYRSKSDGDGISIF
GSTNVWVDHVSMSNCQDGLIDAVEASTAITISNCHFTKHNEVNYLQIPSLKFPLETKSLI
FVLKLLQVMLFGASDSSSGDSIMQITLAFNHFGQGLRQRMPRVRWGFVHAVNNDYTHWLM
YAIGGSMHPTILSQGNRFIAPPNANAKEVTKRDYAPESVWKNWVWKSQGDLMMNGAFFVE
SGNPKHAFLKGPDMINSKPGSFVSSLTRFSGSLNCIEGKPC |
NT seq |
1386 nt +upstreamnt +downstreamnt
atgagattcacaaagcataatttgtttttattctttcttgtggttgttctagttgttagc
attgaggcacacattggggagtatgatgagatatggcggaagcgagcccaacaagcaaag
aaagccgctcgccatgcctatcatcctaatcctaagattgtagctaaccatcttaacaac
caggttgacaaggctatacgaggtagcaatagcagaagaagggacctgcacaggtacagc
ggtaaatgcatggctactaatcctatagaccaatgctggaggtgtgacccaaactgggct
cgaaaccgaatgaaactaaccgattgtgtccttggctttggccgcaagacaacgggtggc
aaaggcggaaaaatctacgtagtaaaggacaattcggacaaagacttagttaatcctaag
ccgggcacattgcgccacgctgtcatccagccggagccactttggattatatttgccaag
aacatggtgattaggcttagcgaggaacttattatgaccagcaacaagacgattgacgcc
cgaggaaggcaagttcatattgctcatggtggtggacttatgttacagttcatacacaat
gtgattattagtaaccttcacattcatgatgttaaggctggtagtggtggcttaattaga
gactccgtcaagcattatggttatcgatcgaaaagtgatggcgatggtatttcaatcttt
ggatccacaaatgtttgggtcgaccacgtttccatgtccaattgtcaggatggtctcatt
gatgctgttgaggcttctactgccattaccatttccaattgccatttcactaaacataat
gaagtaaattatctccaaattccaagtcttaaattcccacttgagacaaaaagtttaatt
tttgtgcttaaacttttgcaggttatgttgtttggtgcaagtgatagctcttcaggggac
tctattatgcaaataacacttgctttcaatcattttgggcaagggttgaggcagaggatg
cccagagtgagatggggatttgttcatgctgtcaacaacgattacacacattggctaatg
tatgccatcggaggaagcatgcatcccaccatccttagccagggaaatcgtttcatcgct
cctcctaatgctaacgccaaagaggtgacgaaaagggattatgcacccgaaagcgtgtgg
aagaattgggtgtggaaatcacaaggagatcttatgatgaacggggcgttctttgtagaa
tccggaaatccaaaacatgcattcttgaaaggtcctgatatgatcaactccaagccagga
tcattcgtgagcagcctgacacgattttcaggctctctcaactgcattgaggggaagcct
tgttaa |