Lycium barbarum (goji berry): 132632855
Help
Entry
132632855 CDS
T09483
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B
KO
K07466
replication factor A1
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03030
DNA replication
lbb03420
Nucleotide excision repair
lbb03430
Mismatch repair
lbb03440
Homologous recombination
lbb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132632855
03420 Nucleotide excision repair
132632855
03430 Mismatch repair
132632855
03440 Homologous recombination
132632855
03460 Fanconi anemia pathway
132632855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lbb03000
]
132632855
03032 DNA replication proteins [BR:
lbb03032
]
132632855
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132632855
Transcription factors [BR:
lbb03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
132632855
DNA replication proteins [BR:
lbb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
132632855
DNA repair and recombination proteins [BR:
lbb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
132632855
MMR (mismatch excision repair)
132632855
DSBR (double strand breaks repair)
HR (homologous recombination)
132632855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
PGAP1_3rd
Motif
Other DBs
NCBI-GeneID:
132632855
NCBI-ProteinID:
XP_060204948
LinkDB
All DBs
Position
3:complement(137593710..137597237)
Genome browser
AA seq
614 aa
AA seq
DB search
MTKMVSPDAISTILANPSPDSSSDLPEIIVQVVDLKPTGNRYMFSANDGKLKIKGILQSS
LSSEVISGSIQNLGLIRVIDYTLNDIPTKNEKYLIVTKCEAVSPALKAEYKVEVKNEETD
IGLKRKHEEIGIVLKPKQEIQTKSAAQIVHEQSGNMAPSARMAMTRRIQPLVSLNPYQGI
WTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFFDKFELGKVY
YISKGTLRVANKQFKTVQNDYEMTLNEISQIEEAINEAAFIPETKFSFVPIDELGPYVNG
RELVDVIGVVQSVSPTMSIRRKSNNETVPKRDVTIADETKKTVVVSLWNDLATNVGQELL
DMADKSPVVAIKSLKVGDFQGVSLSALSKSNIVVNPDLPEAKKLRSWYDSEGKEASLASI
GSGMSPSTKSGARSMYSDRVTLLHIISNPSLGEEKPVFFSIKAYISFIKPDQTMWYRACK
TCNKKVTDAFGSGYWCEGCQKNDAESSLRYIMVLKVSDASGEAWLSTFNDQAEIILGCSA
DELDRLKSEEGETAYQMKLKEATWVPHLFRVSVAPQEYNNEKRQRITARAVAPVDYAAES
KYLLEEMSKMNISM
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaatggtgagcccagatgccatttcgactattctagccaacccgtcgcctgat
tcttcttcagatctccctgaaattattgttcaagttgtcgatctcaaacccaccggtaac
agatacatgttttcagccaatgatggaaaactgaagattaagggcattttgcaatccagt
ttgtcatctgaagttatatctgggtccatacaaaacttgggtcttattcgggttattgat
tacactctcaatgacatcccaaccaagaatgaaaagtacttgattgtaactaagtgtgag
gctgtgtcacctgcgcttaaagctgagtacaaggttgaagtgaaaaatgaagagactgac
attggcttgaagaggaagcatgaagaaattggtattgttttgaaaccaaaacaggaaatt
caaactaaatctgctgctcagattgtacatgaacaaagtggaaatatggcaccatctgct
cgaatggcaatgacgagaagaattcagccacttgtttctttgaacccttaccaaggaatt
tggaccattaaggttcgtgtaactagcaaagggaatatgagaacttacaagaatgctaga
ggagaaggctgtgttttcaatgttgaattaactgatgaggatggtactcaaatacaagct
acaatgtttaatgaagctgcaaggaagttttttgacaagtttgaattggggaaagtctat
tacatttcaaagggaactcttagggtcgctaataagcagttcaaaactgtacaaaatgat
tatgagatgactttgaatgaaatttcccaaattgaggaggctattaatgaagcagctttt
attccagaaacaaaatttagctttgtcccaattgatgaattgggtccatatgtcaatggc
agggagcttgttgatgttattggagttgtccaaagtgtttctcctacgatgagcatacgg
aggaagagtaacaatgagacagtcccaaagcgtgatgtaactattgcggatgagacgaaa
aagactgttgttgtgtctctttggaatgatcttgccactaatgtaggacaagaactgcta
gacatggctgataaatctccagtagttgcaatcaaatcccttaaagttggagacttccag
ggagtgtctttatcggcattaagcaaaagtaatattgttgttaatccagatttacctgaa
gccaaaaaattgagatcttggtatgattctgaaggtaaagaggcttcattggcatctatt
ggttctggtatgagcccctctaccaagagtggagcacgatctatgtactctgatagggtc
accttgcttcatataatcagtaacccatcccttggtgaggaaaagcctgtgtttttcagc
attaaggcatatataagtttcattaagccagatcaaaccatgtggtatcgagcttgcaag
acatgtaacaagaaagttactgatgcttttgggtctggctattggtgtgaaggatgccag
aagaatgatgctgagtctagtttgagatatataatggtattgaaagtttctgatgcaagc
ggtgaagcatggctctctacgttcaatgatcaagcagagataatacttggatgttctgct
gatgaacttgacagacttaaatctgaggagggagaaactgcatatcaaatgaaattgaag
gaagctacatgggttcctcaccttttccgggtcagtgttgctccacaagagtacaacaat
gagaaaaggcaaaggataacagccagggctgttgctccagttgattatgcagcagaatcc
aaatacttgttggaagagatgtctaagatgaatatttctatgtaa
DBGET
integrated database retrieval system
