KEGG   Lycium barbarum (goji berry): 132632863
Entry
132632863         CDS       T09483                                 
Name
(RefSeq) histone deacetylase 5 isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
lbb  Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lbb03036]
    132632863
Enzymes [BR:lbb01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     132632863
Chromosome and associated proteins [BR:lbb03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     132632863
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 132632863
NCBI-ProteinID: XP_060204962
LinkDB
Position
3:complement(137682176..137691377)
AA seq 651 aa
METTKRRRIGLIYDERMCKHSDPNDEFHPEKPDRIRAIWNKLHSTGITHRCVVMDGKEAE
DKDIALVHSKNHIDLIRNISSEKIGLRRNGIAAKFSSIYFNEGSSESAYLSAGSVIEVAE
KVAEGELDSAFAIVRPPGHHAEENEPMGFCLYNNVAVATRYLLDERPDLGIKKILIVDWD
VHHGNGTQKMFWKDPRVLFFSVHRHEFGSFYPGGEGGSHVMTGEGPGAGYNINVPWENGG
CGDADYLAVWDHILIPVAKEFDPDIILISAGFDAAIGDPLGGCRVSPYGYSVMLHKLLEF
AGGKIVMALEGGYNLESIANSVQACIEVLLQQKPIVGSSEAYPFESTWRVIHAVREELSS
FWQTLAERLPEKVTSMRTPYIQVISSESEDEYDTTPQRVLQDLNKDIENIIQPFSDLKVN
DGTGIASQASTISHTWRAELSKIDIWYATFGSNMNLSRFLCYIAGGQVEGMRKPCIGSLD
KSKPKEVTWKTFPHRLFFARERTATWGPGGVAFLHPESNSDEKSYLCLYRITLEQFNDVL
LQENVSSFDMNSPLFDMNGLQSIENRKCISVEAVKNGWYHNVLYLGKENGIPILTMTCRL
SDVENFKSGKVSMCKPCKEYANTLIRGLVEGKQLSEEEATAYIQEAANRPL
NT seq 1956 nt   +upstreamnt  +downstreamnt
atggaaacgacgaaacgacgacgtatcgggcttatatacgatgaaagaatgtgtaagcat
tctgatccaaacgatgagttccatcccgagaaaccagatcgtattcgtgctatatggaac
aaacttcactctactggaattactcacagatgtgttgttatggatggaaaggaagcagaa
gataaagatatagctttggtacattcaaaaaatcacattgatttgattagaaatataagt
tcagagaaaattggcttaagaagaaatggaattgctgccaagtttagctccatctatttc
aatgaaggctcctcagaatcagcttatctttctgctggttctgtcatagaggttgctgag
aaagttgccgaaggagaactagactcggcctttgctattgtcagacctcctggacatcat
gcagaagaaaatgaaccaatgggattttgtttgtacaacaatgttgctgtagcaacacgt
tatctcttggatgaaagacctgatttggggattaagaaaattttgattgttgattgggat
gtccatcatggaaatggcactcaaaagatgttctggaaggaccctcgagtacttttcttt
tctgtgcataggcatgagtttggaagtttttatcctggtggtgaaggtgggtcacatgtc
atgactggtgaagggccaggagcaggatataatataaacgttccttgggagaatggcgga
tgtggtgatgcagactaccttgcggtgtgggatcatatcttgattcctgttgccaaagaa
tttgatcccgacatcatcctgatctctgcaggatttgatgcagctattggtgatcctctt
ggtggatgtcgtgttagtccatacgggtattcggtaatgttgcacaagttgttggagttt
gccggaggcaagattgtaatggcacttgaaggtggatataatctggagtctatagcaaat
tctgtccaagcttgtattgaagtgctattacagcaaaaaccgatcgttgggtcttctgag
gcatatccatttgaatccacatggcgagtgatacatgctgtacgtgaagagttgagttct
ttctggcaaacacttgcagagagattaccggagaaagtaactagcatgagaactccttac
attcaggtcattagctctgaatctgaagatgagtatgataccactcctcagagggtattg
caagatctgaataaggatattgagaatataatacaaccattttcagacctgaaagttaat
gatggtacaggcatagcaagtcaagctagcactatttctcacacctggagggcagagctt
tcaaagattgacatatggtatgccacatttgggtcaaatatgaatctatcaaggttcctt
tgctatattgcaggaggacaggtggaaggcatgcgaaagccatgtattggttcattggat
aaaagcaagccaaaggaggtcacatggaaaacttttcctcatcgtctattctttgctcgt
gagcgtacagctacatggggtccgggtggggttgcttttcttcaccctgaaagcaacagt
gatgaaaaatcttacttgtgcctatataggataacgcttgagcaatttaatgatgtttta
cttcaagagaatgtttcgagctttgacatgaattcccctttgtttgacatgaatggctta
caatctattgaaaacagaaaatgtatttcagtggaggctgtcaagaatggctggtaccat
aatgtgctttacctggggaaggagaatggtattcccattttgacaatgacatgccgactc
tcagatgttgagaacttcaaatcaggtaaagtaagtatgtgcaaaccatgtaaagaatat
gccaatactctaattagagggttggtagaaggaaagcagctttcggaagaagaagccacc
gcttacattcaagaagcagctaacagaccattgtga

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