Lycium barbarum (goji berry): 132633042
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Entry
132633042 CDS
T09483
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132633042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132633042
03036 Chromosome and associated proteins [BR:
lbb03036
]
132633042
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132633042
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
132633042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
132633042
NCBI-ProteinID:
XP_060205221
LinkDB
All DBs
Position
3:complement(140498390..140504977)
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AA seq
1034 aa
AA seq
DB search
MEVDLGTSDQLIVSQSQCKRRKVSALDHVLGEKEAVLPTLRSPDYFTEPCLSELAIRELM
SPGYCSKVVNFTVGRFGYGFVKFSGETDVRGLDLDRIVKFRRHEVIVYEDENDKPPVGVG
LNKPAEVTLLLKIRSSKHDDVDSSREMVEKLRLRTERQGARFISFDPSNGEWKFVVQHFS
RFGFDEEEDDEDMMIDDVSAEVQDPVDTNGGDVSDIDEETMLANTTDLSHSLPAHLGLDP
VKMNEMRMLMFPAEEEDIDDYHDFPSDRKPQFSQESSKSPLQHKYRRVSPPLTRKTPLAL
IEYKHGSFGSDSPGSILLTQQNKGVLLNTTKSEGFKLDVKEQTPISGSFSCNVVDAGLFM
GRSFGIGWGPNGVLVHSGAPVGSKDNHSLSSIINLEKVAFDQVARDENKKFREELVDLCF
DSALHLHKDISHETKEFGEEPLTLKLQRVVCDRLMLSDVCRSYIGVIERQLEVPGLSSAS
RVLLMHQAMIWELIKVLFSSRQLSGKLKSLEDEDEEDMIPDAGEAASDVDPEALPLIRRA
EFSYWLQESVCHRVQEEVSSLNDSSDLQHMFLLLTGRQLDAAVELAASRGDVRLACLLSQ
AGGSMVNRSDVAKQLDIWRVNGLDFNFVETERIRVLELVAGNIHRALHDVDIDWKRFLGL
LMWYQLPPETELPVVFRTYQRLLNEGKAPSPVPVYIDEGPIEASMNWHAVKHFDLGYYLM
LLHANQEIDFSALKTMFSAFASTNDPLDYHMIWHQRAVLEAIGAFSSNDLHVLDISFISQ
LLCLGQCHWAVYVVLHMPHREDCPYLHTALIREILFQHCETWSSQDLQRQFIEDLGIPSA
WLNEALATYFNYYSDFPKALEHFLECGKWQKAHTIFMTSVAHSLYLSEEHSEIWRLAASM
EDHKSEIEDWDLGAGIYISFYLLRSSLQEDSVAMNQVDSLDNKDNACADFISRLNDSLAV
WTSRLPVKARVVYSKMAEEICNLLLSDNCGTSSNEVQLSCYDTVFKAPIPEDTRAYHLQD
AVSLFTSYLSEVPS
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggatttagggacttctgatcaacttattgtttctcaatctcaatgtaaaaga
agaaaagtttccgctttagatcatgttttgggcgagaaagaagctgttttaccgaccttg
agatctcctgattattttactgagccatgcttgagtgaattggctatccgggagcttatg
agcccggggtattgcagtaaagttgtgaattttactgttgggaggtttggttatgggttt
gtcaaattttctggggaaacagatgttagggggttggatttggatcgaattgttaagttt
agaagacatgaagtgattgtatatgaagatgaaaatgacaagcctccagttggtgtgggg
cttaacaagcctgctgaagtaactttgctactgaaaatacgatcctcgaaacacgatgac
gtggattcttctagagaaatggtggagaaattaaggcttagaacggagagacaaggagca
cgttttatctctttcgatccatcaaatggagaatggaaattcgtcgttcagcatttcagc
agatttggtttcgatgaggaagaagatgatgaagatatgatgattgatgatgtgtctgca
gaagttcaagatccggtggatacgaacggaggagacgtttccgacattgatgaagaaacc
atgctagccaatacaactgatctttcacattctcttcctgctcatcttgggttagatcct
gtaaagatgaacgaaatgagaatgctgatgtttccggcagaagaagaggatatagatgat
tatcatgattttccttctgatagaaaaccacaattcagccaagaatcttcaaaatcccct
ttgcagcacaaataccggagagttagtccacctttgactcgcaagactccattggctttg
attgaatacaaacatggtagttttggctcagactcacctgggtccattttgttgacccaa
caaaataagggtgtgcttctaaacaccacaaagtctgaaggtttcaagctggatgtaaag
gagcaaacacctataagtggaagcttctcttgtaatgttgttgatgcaggactgttcatg
ggtagatcatttggaattggctgggggcctaatggtgttcttgttcattctggcgcgcca
gttgggagtaaagacaaccacagtttgtcctcgataatcaatttggagaaggttgcattc
gaccaagtagctagagatgaaaataagaagtttagggaggaacttgttgatttgtgtttt
gattcagccctccatcttcacaaggacattagtcatgaaaccaaagagttcggggaggaa
ccccttacgttaaagcttcaaagagttgtgtgtgatcgtctaatgctttcagatgtatgt
cggagttatattggtgtcattgagaggcaattggaggttcctggcttatcttcagcatcc
cgtgttcttctgatgcaccaagcaatgatttgggaattaataaaagtgctattttcgtct
agacaattgagtgggaaattaaagtctctagaagatgaggatgaggaagatatgatacct
gatgcgggagaagctgcttcagatgttgatccagaagcacttccattgataaggagagca
gaattcagctattggttgcaagagagtgtttgtcacagggtacaggaagaagtaagttct
ttgaacgattcaagtgatctacaacatatgttcttacttctaactggtcggcagctggat
gctgctgtggaactggcggcttctaggggagatgtgagacttgcttgtcttcttagccaa
gctggtggttcgatggttaatcgttctgatgttgctaagcagcttgatatttggagagta
aatgggttggacttcaattttgttgagacagagaggattagggttcttgagttggttgct
ggcaacattcatagagctttgcatgatgtagacattgactggaaaaggtttctggggctg
ttgatgtggtatcagcttccaccggagactgaattgcctgttgtgttccgcacatatcag
cggcttctcaatgaaggaaaagctccatctccagttccagtttatattgatgaaggacct
atagaagcctctatgaattggcatgcagtgaaacattttgacctaggttactatctgatg
cttcttcacgccaatcaagaaattgatttcagtgctctaaagacgatgttcagtgccttc
gcttcaacaaatgatccccttgactaccacatgatctggcatcaacgagctgttttagaa
gccattggtgctttcagttctaatgatcttcatgtgctagacattagtttcatttctcag
ctgctatgtcttggtcaatgtcattgggctgtctatgtggttcttcacatgccgcaccgt
gaagattgtccttatttacacactgctcttataagggaaatactcttccagcactgtgaa
acttggagttctcaggacttacagcggcaatttattgaggacctaggtattccatcagca
tggttgaatgaggctttggcaacatattttaattattactctgattttcccaaagcgcta
gaacactttttggagtgcggaaagtggcagaaagcgcacaccatttttatgacttcagtt
gctcattctctttatctatcagaggaacattcagaaatatggaggctagcagcttccatg
gaggaccacaagtcagaaattgaagattgggatctgggagctggaatatatatatctttt
tatttgttgagaagttctttgcaggaggatagtgtcgctatgaaccaagtggactctcta
gataacaaggacaatgcatgtgcagacttcatcagtcgcttaaacgactctttggctgtt
tggactagcagattgcctgtcaaagctagggtggtttattcgaagatggctgaggagata
tgcaatttgctgctttctgataactgtggaacttcatcaaatgaggttcagttaagctgc
tacgataccgtattcaaggcacccattcctgaagatacccgtgcataccatttgcaggat
gctgtgtctctttttacatcttacctttctgaagtgccatcatag
DBGET
integrated database retrieval system
