Lycium barbarum (goji berry): 132633165
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Entry
132633165 CDS
T09483
Name
(RefSeq) auxin response factor 2A
KO
K14486
auxin response factor
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
132633165
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Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
132633165
NCBI-ProteinID:
XP_060205381
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Position
3:142297940..142304370
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AA seq
849 aa
AA seq
DB search
MATSEVSIKGYNEPNDGSRQVLETVKSNSGAGKVDAETALYTELWRSCAGPLVTVPREDE
LVYYFPQGHIEQVEASTNQVADQQMPLYNLPSKILCRVVNVLLKAEPDTDEVYAQVTLMP
EPNQDENTVKKETMRPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQ
PPTQELVAKDLHRNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGEL
RVGVRRAMRQQGNAPSSVISSHSMHLGVLATAWHAIQTKTMFTVYYKPRTSPAEFIVPYD
QYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPKRWLESKWRCLKVRWDEN
STIPRPDRVSPWKIEPALSPPALNAPPIARPKRPRSSILPSSPDSSVLGREGSSRVTADH
SQPSVFSRVLQGQELSTVRGGFAESNESDLSEKSMIWQPSVDDEKNAIHSASKRYLSDKW
LPLGRPESSLTDLLSGFGVQNNSSHGFCLPSADQAAFGAGLVKRQAQDQEKDFSLLGKPW
SLLSSGLSLNLMDSGSKAPGQGGDTPYQMRGDARYSGFGEFSVLPGHRAENQQGSWIMPQ
SVSPYIQLSSHSRDMMHKPTVAKQPEAVKPEGNCKLFGIPLTSNVCTDPVMMRKSSLINS
ASDMNIVIHTHQSPATDSDQRHEQSKGSKVDDGIAANDHDKQFHTFHLAARDRDGKGHSS
STRSCTKVHKQGRALGRSVDLAKFNNYDELIAELDQLFDFNGELKAGSKSWLVVYTDDEG
DMMLVGDDPWQEFCGMVRKIFIYTKEEVQRMNPGTLNSKGEDTSSVAEGSEAKEVKNLQL
PSESGQEES
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggctacttcggaggtatcgattaaaggttacaacgagccaaatgatggctcaaggcaa
gttttagagactgttaagagtaattccggtgccggaaaagttgatgctgagacggcgttg
tatacggagctatggcggtcatgtgcgggtccattagtgacggttcctcgtgaggatgag
ctggtgtattatttccctcaaggtcatattgagcaggttgaagcatcaactaatcaagtg
gctgaccagcagatgcctttgtataatcttccttctaagattctatgccgtgtcgttaat
gtcctgttgaaggctgaaccagatactgatgaggtgtatgcacaagtgactttgatgccg
gagccaaatcaagatgagaatacagtgaagaaggaaactatgcgccctcctccaccacga
tttcatgtacactcgttttgtaagacactaacagcctctgatacaagcactcatggtgga
ttttcagtcttgagaaggcatgctgatgaatgcctccccccactggatatgtctcggcag
cctccaacgcaggagttggtggccaaagatttacataggaatgagtggcgcttcaggcat
atattccggggccaaccaaggaggcatcttcttcagagtggttggagtgtcttcgttagt
tcgaagaggcttgtcgctggggatgcattcatatttcttagaggtgagaatggggagctt
cgtgttggagttagacgtgccatgagacagcaagggaatgccccatcatcggtgatatcc
agtcatagcatgcatctcggtgtacttgcgacagcttggcatgccattcagacaaaaaca
atgttcactgtgtattacaaaccaaggacaagccctgctgagtttatagttccctatgat
cagtatatggaatctgtgaaaaacaattactctattggaatgaggtttaagatgaggttt
gaaggtgaagaagctccagagcagaggtttactggaactatagttggcattgaagatgct
gatcccaaaaggtggcttgaatctaagtggagatgtctgaaggttcggtgggatgaaaat
tctaccattccaaggccagaccgagtttcaccctggaaaatagaaccagctcttagccct
cctgcacttaatgcacctccaatcgcaaggccaaaaaggcctagatccagtattttgccc
tcatctcctgattcatctgtccttggtagggaaggttcatccagagtaactgcagaccat
tcccaacccagtgtgttttcgagggtcttgcaaggtcaagagttatcgaccgttagaggc
ggttttgcagaaagtaatgagtcagacttgtctgagaaatcgatgatatggcaaccatca
gtggatgatgaaaagaatgctattcattccgcatctaagagatatctttcagataaatgg
ttacctttggggaggcctgagtcatctctcacggatctattatcaggttttggagtgcaa
aataactcctcccatgggttctgtttaccttctgcggaccaagcagcatttggtgctggc
ttggtgaagcgacaagcacaagaccaggaaaaagattttagcttactgggaaaaccatgg
tctctattgtcttcgggtctctctcttaatctgatggattcaggctcaaaagctcctggc
caagggggtgatactccctatcaaatgcggggagatgctaggtacagtggttttggcgag
ttctcagtccttcctggtcatagagctgagaatcagcagggaagctggattatgcctcaa
tcagtgtcgccttacattcagctctcctctcattcaagagatatgatgcataaacccact
gtagcaaagcagcctgaggctgtgaaacccgaggggaactgcaaattatttggcattccc
cttacaagtaacgtttgcacggatcctgttatgatgcgaaaaagttcattgatcaattca
gcaagtgacatgaatattgttatacacacccatcaatcccctgccactgattctgatcaa
aggcatgagcaatcaaagggatcaaaggtggatgatggaattgcagctaatgatcatgac
aaacaatttcatacctttcatcttgctgctagagatagggatggcaaaggtcatagtagt
tcaacaaggagctgcacaaaggttcataaacagggtagagcactcggaaggtcagtggat
cttgcaaagttcaacaattatgacgaattgattgctgaactggatcagctttttgatttt
aatggtgaactcaaggctggaagtaagagttggctggttgtatacactgatgatgagggt
gacatgatgcttgttggagatgatccatggcaggaattttgtggtatggttcgcaagatt
tttatctatacaaaagaggaggtgcagcgtatgaatccggggactcttaattcaaaaggt
gaagacacgtcttctgtcgcagagggctcagaagctaaagaagtgaagaatctgcaactt
ccttctgaatctggtcaagaagagtcttag
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