Lycium barbarum (goji berry): 132633174
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Entry
132633174 CDS
T09483
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lbb03000
]
132633174
04121 Ubiquitin system [BR:
lbb04121
]
132633174
Transcription factors [BR:
lbb03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
132633174
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
132633174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
132633174
NCBI-ProteinID:
XP_060205396
LinkDB
All DBs
Position
3:142404013..142409265
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AA seq
1433 aa
AA seq
DB search
MSFNAQNNNNNNNRRNNNNNRITRNNNLVQSAARWVARGSTATNTVSAAPAPLTTVTTTL
VTPGFGVNGSSSTGNGRDDVPVNRNQNQTYVEPKYNRVNQRRETVNGSSSAGNGGGQDNE
SPVHRNHKYAEPKHNRAMYTSQRRERVNGSSSAVNGREDKDNVSVAPANRNQTYAEPKYN
RATYTNQRREGVNGSSSAVNGREDKDNVSVAPANRNQTYAEPKYNRATYTNQRREGVNGS
SSAVNGREDKDNVSVAPANRNQTYAEPKYNRATYTNQRREGVNGSSSAVNGREDKDNVSV
APANRNQTYAEPKYNRATYTNQRREGVNGSSSAVNGREDKDNVSVAPANRNQTYAEPKFN
RETYTNQRREGVNGSSSAVNGREDKDNVSVAPANRNQTYAEPKFNRATYTNQRGERGRGS
ENHNQSHGYQENRVERPANGRINQGEHKQLKDPNLPQLVQEIQEKLSKGNIECMICYDMV
GRSARIWSCSSCYSIFHLNCIKKWARAPTSVDTSAEKNQGLNWRCPGCQSVQLTSSRDIP
YLCFCGKRQEPPSDLYLTPHSCGEPCGKKLEKELPGHDGLSEEDLCPHVCVLQCHPGPCP
PCKAFAPARSCPCGKEVITTRCSDRKSVLTCGQQCGKLLDCGRHRCEQTCHVGPCGHCQI
VVNAYCFCKKKTEAVLCGDMGVKGDIKMEDGVFSCNSACGKKLSCGNHVCHELCHPGPCG
DCALLPSKVKTCCCGKTSLEEERHSCLDPIPTCSKVCGKSLRCGVHRCEAVCHSGDCTPC
LVPVTQRCCCGSTSRTVECYRTQSEDEKFTCDRPCQQKKNCGRHRCSERCCPLSNPKNSV
TGDWNPHFCSMPCEKKLRCGQHSCESLCHIGHCPPCLETIFADLTCACGRTSIPPPLPCG
TPTPACQLPCSVPQPCGHPATHSCHFGDCLPCAVPVAKECVGGHVILRNIPCGSKDIRCN
KLCGKTRQCGLHACARTCHPSPCDVSAGPSNGSRASCGQTCGAPRRDCRHTCTALCHPSS
SCPDVRCEFPVTITCSCGRITANVPCDAGGQSVDSLFEASIIQKLPSPLQPIETNGKKVP
LGQRKLTCDDECAKMEKKKVLSDAFGISPPNLEALHFGENAAVSEVLGDLLRRDPKWVLS
IEERCKFLVLGRSRGGVNALKVHVFCPMLKEKRDAIRLIAARWKLSVNAAGWEPKRFIVI
HVTPKSKAPARILGAKGCTVNNIAQPAAFDSLVDMDPRLVVALFDLPRDADISALVLRFG
GECELAWLNDKNALAVFSDPARAATAMRRLDQGSAYCGAALVPHSGVASAVTSSTANAWG
VSGGAKDLKGNPWKKAVVQEPHLRESPWDAEEWSKNPTDSATPSAWRANEAPPTASSNRW
SVLEPEVTSSLPRASITIKEPVTEPEVGGSVFPPKPGVDDMADVVDDWDKAYD
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgagctttaatgcacaaaacaacaacaacaacaacaatagaaggaataataacaataat
cggattactagaaataataatcttgttcaaagtgctgctcggtgggtagctcggggatcc
actgccaccaacactgtttcagctgcccctgcccctctcaccacggttacaaccacactt
gtgactcctgggttcggtgtaaatggttcaagttcaactggtaatggaagggatgatgtg
ccggttaatcgaaaccaaaatcagacctatgtggaacccaaatacaatagggtgaatcaa
aggagagagactgtaaatggttcaagttcagctggtaatggaggaggccaggataatgag
tcaccagttcatcggaatcacaaatatgcggaacctaaacacaatagggcgatgtatacg
agtcaaaggagagaaagggtaaatggttcaagttcagctgttaatggaagagaagacaag
gataacgtgtcagttgcaccagctaatcggaatcagacgtatgcggaacccaaatacaat
agggcgacgtatacaaatcaaaggagagagggtgtaaatggttcaagttcagctgttaat
ggaagagaagacaaggataacgtgtcagttgcaccagctaatcggaatcagacgtatgcg
gaacccaaatacaatagggcgacgtatacaaatcaaaggagagagggtgtaaatggttca
agttcagctgttaatggaagagaagacaaggataacgtgtcagttgcaccagctaatcgg
aatcagacgtatgcggaacccaaatacaatagggcgacgtatacaaatcaaaggagagag
ggtgtaaatggttcaagttcagctgttaatggaagagaagacaaggataacgtgtcagtt
gcaccagctaatcggaatcagacgtatgcggaacccaaatacaatagggcgacgtataca
aatcaaaggagagagggtgtaaatggttcaagttcagctgttaatggaagagaagacaag
gataacgtgtcagttgcaccagctaatcggaatcagacgtatgcggaaccgaaattcaat
agggagacgtatacaaatcaaaggagagagggtgtaaatggttcaagttcagctgttaat
ggaagagaagacaaggataacgtgtcagttgcaccagctaatcggaatcagacgtatgcg
gaaccgaaattcaatagggcgacgtatacaaatcaaaggggagagaggggaaggggcagt
gagaaccataatcagagccatggttatcaggagaatagggtggagaggccggctaatggg
aggattaatcaaggagaacacaaacagttgaaggaccctaatttgcctcaacttgtgcaa
gaaattcaggagaagctgtcgaaggggaacattgagtgcatgatatgctatgatatggtg
gggaggtctgcacgcatttggtcatgttcaagctgttactcgattttccatcttaattgt
atcaagaaatgggcaagagctcccacttctgttgatacgtctgcagagaagaatcaaggg
ttgaattggcgctgtccaggctgtcaatccgtccagctcacttcatccagggacatccct
tatctttgcttttgtgggaagaggcaagaacccccttcagatttgtacttgaccccacat
tcatgtggagagccttgtggcaaaaaacttgagaaggagctcccagggcatgatggtctg
agtgaagaggatctttgccctcacgtttgtgtcctacaatgccatcctggtccttgtccg
ccttgtaaggcatttgctccagctagaagttgcccctgcgggaaggaagtaattaccact
cgctgctctgatcgcaagtccgttcttacttgcggacagcagtgtggtaagcttcttgac
tgtgggcgtcaccggtgtgaacaaacctgccatgttggtccttgtgggcactgtcaaatt
gttgtgaatgcctattgcttttgtaagaagaaaacagaggctgttctttgtggagacatg
ggtgtgaaaggagatatcaagatggaggacggcgtcttttcgtgcaattcagcttgtgga
aagaagcttagttgcggaaaccacgtctgtcatgagctctgccatccagggccatgtgga
gactgtgccttgttgccaagcaaggtcaagacgtgctgttgcggtaaaacaagcttggaa
gaagaaagacacagttgtttagatccaattccaacctgttccaaggtctgtggtaaaagc
ctccggtgtggggtccatcgctgtgaagcggtgtgtcattctggtgattgtacaccatgt
cttgttcctgtcactcaacgatgctgctgtggttcaacttctcgaacagtggaatgttac
agaactcagtcagaagatgagaagttcacttgtgatagaccttgtcagcaaaagaagaac
tgtggaagacatcgttgcagtgagcgatgttgcccactttctaatccaaaaaattccgtc
acaggtgattggaatcctcatttttgttcaatgccatgtgagaagaagcttagatgtggg
cagcattcttgcgagtcactttgtcacattggtcactgccctccctgtcttgagacaata
ttcgccgatttgacttgtgcttgtgggagaacgtcgatcccccctccgctgccttgtggc
acacctactcctgcgtgtcagttaccatgctcggttcctcaaccttgtggccatccagct
actcacagctgccattttggagactgcttgccatgtgcggttcccgtagcaaaggaatgc
gttggtgggcatgtaattttgagaaatataccttgcggatcgaaggacatcagatgtaac
aagctttgtgggaagaccaggcaatgtggcttgcatgcatgtgctagaacttgtcatcct
tcaccgtgtgatgtttctgcaggacccagcaacggctccagggcctcttgtgggcagacg
tgtggtgctcctagaagagattgcaggcacacatgtactgctctttgtcacccctcttcg
tcatgtccagatgttagatgtgagtttcctgttactattacttgttcttgtggccggatc
acagcaaatgttccttgtgatgctggaggtcagagcgttgattctcttttcgaagcttct
ataatccaaaagttgccttcacctcttcaacctattgaaacaaatgggaagaaggttcct
cttggtcagaggaagctcacttgtgatgatgagtgtgcgaagatggagaagaaaaaggtt
ctttctgatgcttttggtataagtcccccaaatttggaggccctccattttggtgagaat
gcagctgtgtcggaagtgctgggggatcttcttaggcgtgaccccaagtgggttttgtct
atagaggaaaggtgcaagtttttggttcttggcaggagcagaggcggggttaatgcgctc
aaagttcatgttttttgcccaatgttgaaggagaagcgggatgcaattagactgatagct
gcaaggtggaagctttcagtaaatgcagctggttgggaacccaagagattcatcgttata
catgttacacccaagtcaaaagctccagcgcgtattcttggtgccaaaggttgtaccgtc
aataacattgctcagcctgctgcttttgattctctggtggatatggatccaaggcttgtt
gtggctttgtttgacttgccaagagatgcagacattagtgctttagttctcaggtttggt
ggtgaatgtgagcttgcctggttgaatgacaagaatgccttggccgtgttcagtgatcct
gcccgagcagcaacagctatgagaaggctagaccaggggtcggcttattgtggtgctgct
ctagttcctcatagcggtgttgcatcagcagtgacatcatccactgctaatgcttgggga
gtttccggaggagccaaggatcttaagggtaatccatggaagaaggctgtagtccaggag
cctcatttgagggagagtccatgggatgccgaagaatggtccaagaatcccactgattca
gctactccttcggcctggagggcgaatgaagctccacctactgcctcttctaataggtgg
agtgtcttagagcctgaagttacttccagtttgcccagggcctctattacgatcaaggaa
cctgttactgagccagaagtggggggttcagttttcccccccaaacctggagttgacgat
atggcagatgtagtggacgattgggacaaggcttatgattga
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integrated database retrieval system
