KEGG   Lycium barbarum (goji berry): 132633202
Entry
132633202         CDS       T09483                                 
Name
(RefSeq) uncharacterized protein LOC132633202
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
lbb  Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lbb03009]
    132633202
   04121 Ubiquitin system [BR:lbb04121]
    132633202
Ribosome biogenesis [BR:lbb03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    132633202
Ubiquitin system [BR:lbb04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     132633202
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Sof1 Beta-prop_EML_2 WDR55 WD40_WDHD1_1st EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 NBCH_WD40 ANAPC4_WD40 Beta-prop_RIG_2nd WD40_RFWD3 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st eIF2A Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_WDR19_1st VID27 WDR54
Other DBs
NCBI-GeneID: 132633202
NCBI-ProteinID: XP_060205448
LinkDB
Position
3:142860816..142884491
AA seq 452 aa
MRLKVISRSTDEFTRERSQDLQRVFRNFDPNLRPQEKAVEYVRALNAAKLEKIFARPFVG
AMDGHIDAVSCMAKNPNHLKGIFSGSMDGDVRLWDLATRRTVRQFPGHQGAVRGLTVSTD
GRILVSCGTDCTVRLWKVPVATLMESDDGSDHSSQPLAVHVSKNAFWGVDHQWDGDLFAT
AGAQVDIWNHNRSQPVNSFKWGNDTVTSVRFNPGEPNLLATSASDRSISIYDLRLSSPAR
KVIMTTKTNAIAWNPMEPMNFTAANDDGKCYSYDVRKLNEAKCVHKDHVSSVMDIDYSPT
GREFVTGSYDRSVRIFQYNGGHSREMYHTKRMQRVFCVKFSCDASYIISGSDDTNLRLWK
AKASEQLGVILPRERKKHEYLEAVKNRYKHLPEVKRIVRHRHLPKPIYKATKQIREITES
ERRREERRKAHSAPGSIQNKPLRTQRIITEAE
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgcggttgaaagtgatatctcggtctacagatgaatttactcgtgaacgcagtcaggat
ctccagagagtttttcggaacttcgatcccaaccttcgacctcaagagaaggcagtggaa
tatgttcgcgccctgaatgcagcaaaactagagaagatatttgcaaggccatttgttgga
gcaatggatgggcacattgatgctgtctcttgcatggcaaagaatcctaatcacttgaaa
ggaatattttctggctccatggacggagatgttcgcctatgggatttggctaccaggcgg
acagtacgtcagtttccaggtcaccagggtgcagtacgtggtttgacagtgtccacggat
ggccgtattcttgtatcatgtggaactgattgcactgttaggctctggaaagttcctgtt
gctactctaatggagtcggatgatggatctgatcactcatcccagccattggctgttcat
gtctcgaagaatgcattctggggtgttgaccaccaatgggatggtgatctttttgccaca
gctggtgctcaagtcgacatttggaaccataacaggtctcagccagttaatagttttaaa
tgggggaatgacacagttacatctgttcggtttaatccaggggaacctaatcttttggca
acatcagcaagtgatcgtagcataagcatctatgatttacggctttcttcgccagctaga
aaggttattatgacgacaaaaactaatgctatagcatggaatcccatggagccaatgaat
tttactgccgctaatgacgatggcaagtgctacagttatgatgttagaaaattaaacgaa
gccaaatgtgtgcataaagatcatgtctcttcagtgatggatatagattattcaccaacc
ggtcgagaatttgtgactggatcttatgatagatcagtgagaattttccaatataatggc
ggtcacagcagggaaatgtatcacactaagaggatgcagagggtattctgtgtcaagttc
agttgcgatgcaagttatattatctcaggaagtgatgataccaaccttcgtctttggaaa
gcaaaagcatctgaacaattgggagttattttgccaagagaacggaaaaaacatgagtat
ttggaggctgtcaagaatcgttacaaacatcttcctgaagtcaagcgcattgtcagacac
aggcacttgccaaaaccaatctacaaggcaaccaaacaaatacgtgagatcactgaatct
gagaggcgaagagaggagaggaggaaagctcacagtgccccaggaagcattcaaaataag
ccattgcggacgcaaagaattatcacagaagctgaatga

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