KEGG   Lycium barbarum (goji berry): 132633233
Entry
132633233         CDS       T09483                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132633233
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lbb03041]
    132633233
   03400 DNA repair and recombination proteins [BR:lbb03400]
    132633233
Spliceosome [BR:lbb03041]
 Complex B
  Other components
   Prp19 complex
    132633233
 Complex C
   Prp19-CDC5 complex
    132633233
DNA repair and recombination proteins [BR:lbb03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    132633233
SSDB
Motif
Pfam: BCAS2 THOC7
Other DBs
NCBI-GeneID: 132633233
NCBI-ProteinID: XP_060205490
LinkDB
Position
3:complement(143352096..143355835)
AA seq 261 aa
MNIIISLLQTMATLDGDVLMLEAPPESGPAVCSSAEVIDALPYIDEDYGHPNVKDDVDRL
VEEEMRRSSKKPSDFLKNLPPLRKFNFQNHPMLAREYERVRAGKPPVQIDTSRYGLEVPP
VNKRNDETAWKQALQKAQRLLQHQVIRLENLDLMSKHGPDVWKLYNQRLEAFLARMQSQA
VELNEMIETVNRERKYHQQTTAYELNALSMQWRELCLKNIEIQSACAEPEDHIAQLKKEA
EERGWNLEANVENGTMLYAES
NT seq 786 nt   +upstreamnt  +downstreamnt
atgaacattattatctctctactgcaaacaatggcgacgttggacggcgacgttttgatg
ctagaagcgccaccggaatctggaccggcagtgtgtagtagtgctgaagtgatagatgct
ttaccgtacattgatgaagattacggtcatcccaacgttaaagatgacgttgaccgtttg
gttgaagaggagatgcgccgtagctccaaaaaaccttctgatttcctcaaaaacttacct
cctcttcgtaaattcaacttccagaatcaccccatgcttgcgagggaatatgagcgggtg
agagctggaaagcctccggtacagatagatacttcacgatatggacttgaagtgccgcct
gtgaacaaacgcaatgacgaaactgcatggaagcaagcgcttcaaaaagctcagcgttta
ctgcagcatcaagtgatcaggctagaaaatctggatctaatgtcaaagcatggtcctgat
gtttggaagctgtacaatcaacgactggaggcatttttagccagaatgcaatcacaagct
gttgaactgaatgaaatgatagaaacagtaaacagggaaaggaaatatcatcagcaaact
accgcatatgagctcaatgcattgtccatgcaatggagagagctctgtctgaaaaatatt
gaaatccaatctgcatgtgcggaaccagaagaccacatagcacaactgaagaaggaggct
gaagagaggggctggaatttggaggctaatgttgagaatggcactatgttgtatgcagaa
tcatga

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