Lycium barbarum (goji berry): 132633242
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Entry
132633242 CDS
T09483
Name
(RefSeq) actin-interacting protein 1-2
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lbb04990
]
132633242
Domain-containing proteins not elsewhere classified [BR:
lbb04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
132633242
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_SPT8
eIF2A
Beta-prop_NWD2_C
KNTC1_N
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
132633242
NCBI-ProteinID:
XP_060205502
LinkDB
All DBs
Position
3:complement(143478702..143484743)
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AA seq
637 aa
AA seq
DB search
METKNEFPNQFHLISHHFHLFHKHKSPLMAELKETYACIPSTERGRGILISGDPKSNSIL
YTNGRSVIIRYLDRPLQVAVYGEHAYQATVARYSPNGEWIASADVSGTVRIWGTHNDFVL
KKEFRVLSGRIDDLQWSPDGMRIVASGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCA
FKPTRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCLRFSPDGSKLISVSSDKKG
IIYDAKTGDIIGELSSEDGHQGSIYAVSWSPDSKQVLTVSADKSAKVWDISDDGKGKVKK
TLASPGSGGVEDMLVGCLWQNDHLVTVSLGGTISIFSASDLEKSPVSFSGHMKNVNSLAV
LRRDPKIILSSSYDGLIVKWIQGIGYSGKLERKVNSQIKCFAVVDEEIVSCAFDNKIWRV
SLLGDQCGDANSIDVGNQPKDLSLALNSPEVTLVSFETGIILLRGTKVLSTINLGFTVTA
SAISPDGTEAIVGGQDGKLHLYSITGDTLSEEVVLEKHRGAITVIQYSPDVSMIASADAN
REAVVWDRASREVKLKNMLYHTARINCLAWSPDNTMVATGSLDTCVIIYDISKPASNRIT
IKGAHLGGVYGIAFTDEHSIVSSGEDACVRVWGITPQ
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaaaaatgagtttccaaatcagtttcacctgatctcccatcattttcacctt
ttccataaacacaaatctcccttaatggctgaactgaaagaaacctacgcttgtatccct
tcaacagaacgtggtcgcggtattctcatttcaggtgacccgaaatccaattccatccta
tacactaacggtcgatccgttattatccgttatctggatcgcccgctacaagttgctgtt
tacggtgaacatgcttatcaagctaccgttgcacgttactctcctaacggtgaatggatc
gcttctgctgacgtgtcgggtacggttcggatctgggggacgcataatgattttgttctt
aagaaagagtttcgggtattgtcgggtcggatcgatgatcttcaatggtcacctgatgga
atgcgtattgttgcttctggtgatggaaaaggcaaatcacttgttcgtgctttcatgtgg
gactcgggaacaaatgtgggtgaatttgatggccattcaaggagagttttgagttgtgca
tttaagcccacaagaccatttcgcatagccacgtgcggagaagactttttggtgaacttt
tatgaaggacccccatttaaattcaagctgtctcacagggggcattcaaattttgttaat
tgtttgaggttctctccagacggaagcaaacttatcagtgtaagctctgacaagaagggc
attatctatgatgccaaaactggagatataattggagagctgtcatctgaggatggtcat
caaggaagtatatatgccgttagttggagtcctgatagtaaacaggtgctcacagtctct
gctgacaagtcagcaaaagtatgggacatatctgatgatggaaaagggaaagtgaagaaa
acactggcttctcctggttcaggtggagttgaggacatgctagttggctgtctctggcaa
aatgaccatcttgttactgtttctcttggcggaactatttccatattctcagctagtgat
ctggaaaaatctcccgtgtcattttctggacacatgaaaaatgttaattccttagctgtc
ctcagacgtgacccgaaaatcatactgtctagcagttatgatggtttgattgttaaatgg
attcaaggcattggatatagcggaaaattagagagaaaggtgaattctcaaatcaaatgc
tttgcagttgtggacgaagaaattgtgtcatgtgcatttgacaataagatctggagagta
tctctgcttggagatcaatgcggagatgcaaattctatagatgtcggcaaccaacctaag
gacttaagccttgcccttaattctcctgaagtgactttagtttcttttgaaactggaatc
attcttctccgtggtacaaaagtgctgtcaaccataaacctcggatttactgtgacagca
tctgctatttcacctgatggaactgaagctatagtgggtggtcaggatggtaaactgcat
ttgtattcgatcacgggtgatactctcagtgaagaggttgtccttgaaaaacacagggga
gctattactgtcattcagtactctccagatgtttccatgattgcatcagcagatgcgaat
cgagaagctgtcgtctgggatcgtgcatctcgtgaggtgaagcttaagaatatgttatac
catactgcccgaataaattgcttggcttggtcacctgataacaccatggtagctactgga
tccctagacacgtgtgttatcatatatgacatcagcaagccagcgtcgaaccgaatcacg
attaaaggagctcatttgggtggagtatatggaatagcttttactgatgaacacagtata
gtgagttctggcgaggatgcttgtgttcgtgtatggggaatcactccacagtaa
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