Lycium barbarum (goji berry): 132633303
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Entry
132633303 CDS
T09483
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132633303
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lbb01002
]
132633303
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbb03021
]
132633303
03036 Chromosome and associated proteins [BR:
lbb03036
]
132633303
Peptidases and inhibitors [BR:
lbb01002
]
Metallo peptidases
Family M1
132633303
Transcription machinery [BR:
lbb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132633303
Coactivators
SAGA/TFTC/STAGA complex
132633303
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
132633303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
HEAT_2
Motif
Other DBs
NCBI-GeneID:
132633303
NCBI-ProteinID:
XP_060205602
LinkDB
All DBs
Position
3:complement(144578960..144599433)
Genome browser
AA seq
1509 aa
AA seq
DB search
MAKARKGKSEEQKGDNNSETVVRHQKLCISIDMEKQRIYGYTELDIVVPENGILGLHADN
LVIDSVTVDGEPTEFEAFPHYLALESGDRWCSVSSTTSAADAAGSTYLSHLDRELLANLL
IMCRKPANHDIERQEEHLENGVNTSAETNQNVKKVRIDYWVEKAETGIHFDGDVLHTDNQ
IRRARCWFPCMDDSLQCCCYDLEFTVASNLVAVSTGSLLYQVWTEDVPARKTYVYKLSTP
VSARWISLAVAPFEILPDHNITHLSHICVPADSTKLRHTVGFFHSAFSYYEDYLSASFPF
GSYTQVFISPEIAISSVSLGASLSIFSSQLLFDEKVINKTIETRIKLAYALARQWFGVYI
TPEAPNDDWLLDGLAGFLTDIFIKRFLGNNEARYRRYKANIAVCRADDSGATALSAVAAS
KNLYGTQCIGLFGKIRSWKSVAILQMLEKQMGPESFRKILQQIVSRAQDVNRSLRTLSTK
EFRHLANKVGNLERPFLKEFFPRWVGSCGCPVLKMGFSYNKRKNMVELAVLRECTARVAS
SATMTNGKPDSEKQEGDGWPGMMSIRVHELDGMYDHPILPMTGEPWQLLEFQCHSRLAAK
RFQKTKKGSKPDGSDDNGDAVANVDTRATSDSPLLWLRADPELEYLAEIHFNQPVQMWIN
QLEKDRDVVAQAQAIATLESLPQLSFAVVNALNNFLCDSKAFWRIRIEAAFALASTASEE
TDWAGLTHLVAFYKTRRFNANIGLPKPNDFRDFPEYFVLEAIPHAIAMVRAADQKSPREA
VEFVLQLLKYNDNSGNPYSDVFWLSALVQSIGELEFGQESIVYLSSLLKRVDRLLQFDRL
MPSYNGILTISCIRSLTQIAVKLSEFVPLDRVIELINPFRTSKTLWKVRVEASRSLLDLE
FQRNGIDAALTLFIRYLDEEPTIRGQVKLGVHAMRLCQIRNESDSDSDVKGEILVALLHL
LESRTSFNNVILRHYLFCILQVLARRAPTLYGVPKDETLRMGHAAFCSNLQNLFADLVKQ
SKPPECPLENLEDKLDGSAMAEAPHEADALLGNENAKAVTSSVPDSLFVSEVRKAADDKE
ANDALLSNEITNTATGAIPDSLVVTEVQNEAEDSLKISHEVMHPVDDLPLASSTAPSREE
FVLPDNEETKPMGPPAADILANRDQGKPVVNLGRDNPGISEPSREPDTVSASHERKKPVF
KIKVKKTVASSQAEDHENAMMDKSHDGFRDVDRGASSSVSVDAPQRNVVEILSSGNNQFP
EDVNSCHDVGSHVTASIGSVKVAIEGEELTKELQCTAESSKVLLVPQPDDHLSTGITRVD
DPEVEPHKYASLHLLTMPNLPVHGKVKEKKKDRGKKRKLEGRKDDPEYLERKRLKKEKKR
KEKELAKLLKDEAKASTPVGSQGKNELRGTQAETIRNDHQTSLVEQESRKDEAELRQVMN
GAEAKATSSGLYSRNEDIGAKGASVQLKPGGSSGVKLNVDRGDTSVNAAPPTSSHKLKIR
IKNRTLGKS
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagctcgtaaagggaaaagcgaagagcaaaaaggggataataattctgaaact
gtggttcgtcatcagaaactatgcatctctattgacatggaaaaacaaagaatttatggt
tacacagagcttgatatagttgtaccagaaaatggaattttgggcttgcacgcggataat
ttggtgatagatagtgttacagttgatggggagcccacagaatttgaagctttcccgcac
tatttagccttggaaagtggggatagatggtgctctgtatcatcaactacatcagctgct
gatgcagctggctcaacttacttgtcacatctagatcgagaattgctagcaaatttgctg
attatgtgcagaaaacccgcgaatcatgatattgaaagacaggaagagcatttagagaat
ggggtgaacacttcagctgaaaccaatcagaatgtgaagaaggtccgtattgattattgg
gtagagaaggctgaaactggaatccactttgatggtgacgttttacacactgacaaccaa
attcggcgtgcacgatgttggttcccctgcatggacgacagtttacaatgttgctgctac
gatttggaatttacagtggccagtaatctagtggctgttagtactggaagcttactttat
caggtctggaccgaggatgttcctgctcgtaaaacttatgtctacaaactaagtactcct
gttagtgctcgatggatatccttggcagttgcaccatttgaaattcttcctgaccacaat
attactcatctctcacatatttgtgtacctgctgactcaacaaagctacgccacactgtg
ggattttttcacagtgcttttagctactatgaggactacctttctgcatcatttccattt
gggtcatacactcaagtttttatttctcctgagatagcaatatcctcagtgagtttagga
gcctccttgagcatcttcagctctcaattactattcgacgagaaggtcattaataagacc
atagagacgaggattaaacttgcttatgcccttgcaagacaatggtttggagtgtatatc
accccggaagcgccaaatgatgattggttgttggatggtcttgctggtttcttgactgat
atattcatcaagagattccttggcaataatgaagcacgctacaggagatacaaggctaat
attgctgtttgcagagcagacgatagtggtgcaactgccctaagtgctgttgctgcttca
aagaatttgtatggcacccaatgtattggtttatttggaaaaataagatcgtggaagtct
gttgcaattctccaaatgttagaaaagcaaatgggacctgagtcatttcgcaagattctt
cagcaaattgtttcccgagctcaagatgtaaatcggtcgttgagaacccttagcacgaaa
gagtttcggcaccttgccaacaaggttggtaatcttgagcgcccctttcttaaagaattc
tttccacgttgggtcggatcatgtggctgtccagtgctgaaaatgggattctcctataac
aaaagaaagaatatggttgagttagctgtattgagggagtgcacagctagagttgcctca
agtgctactatgactaatggtaagcctgactctgaaaagcaagaaggtgatggctggcct
ggcatgatgagcataagggtgcatgagcttgatggcatgtacgatcatccaattctgcct
atgaccggggaaccctggcagctgcttgaatttcagtgtcattctagacttgcagcaaaa
cgttttcaaaaaaccaaaaagggctctaaacctgatggttcggatgataatggtgacgca
gtggctaatgtagatactcgtgcaacctctgactccccgttgttgtggctccgggcagat
cctgaattggagtatcttgctgaaattcattttaatcaaccggtccagatgtggataaat
caattggagaaggacagagacgtggttgctcaggcgcaggctatagcaacattagaatca
ttaccacagctttcttttgcagttgttaatgctctcaacaatttcctttgtgactctaag
gccttttggaggattcgaattgaggcggcgtttgctttggctagtacagcatccgaggaa
actgattgggctggcttgactcatcttgtcgcattttataaaactcgaagatttaatgcc
aatattggacttcccaagccaaatgactttcgtgatttcccggagtactttgtacttgag
gctattccacatgctatagctatggttcgagcagctgaccagaaaagccctagggaagct
gttgaatttgttctacaacttctgaagtacaatgacaatagtgggaacccctactctgat
gtcttttggctctctgcgttagtccagtccattggtgagcttgaatttggacaggagagc
attgtctatttatcatcccttctcaagcgagttgaccggctcttgcaatttgacaggttg
atgccaagttacaatggtattttgacaattagctgcatccgatctttgacccaaattgca
gtaaagctgtcagagtttgttcctcttgatcgtgtcattgagcttattaatccattccgg
acttcgaagacactgtggaaagttcgggttgaagcaagcagatcgcttcttgatctggag
ttccagcgcaacggcattgatgctgcattgacattgtttattagatatttggatgaagag
ccaactataagaggtcaagtgaagttaggcgtgcatgccatgcgtttatgtcagataaga
aatgaatctgattcagacagtgatgtgaagggtgaaatcctagttgctttgttgcacctg
cttgaaagccgaacctcatttaacaatgttattcttcgtcattacttgttctgcatctta
caagtccttgctcgaagagcgccaacactgtatggagtgccaaaagatgaaactttgagg
atggggcatgccgcattttgtagcaaccttcagaatcttttcgctgatcttgtcaaacaa
tctaaacctcctgaatgtcctctggagaaccttgaagataaacttgatggttcagccatg
gcagaagctcctcacgaagcagatgctcttctgggcaatgaaaatgcgaaagctgttact
agctcagtacctgatagtttatttgtatctgaggtccggaaagcagcagatgataaagaa
gcaaatgacgctctattgagtaatgaaattacaaacactgctactggcgctatacctgat
agtttggttgttacagaggtccagaatgaggcagaggattcactgaagatcagccacgaa
gtaatgcatccagtggatgacctcccactggctagttccacagctccttctagagaagaa
tttgtcttacctgacaatgaggaaacaaagccaatggggcccccagcagctgatatcctt
gcaaatcgtgatcaagggaagccggtagtcaatcttggacgagataatccaggaatttct
gaaccttccagagaacctgatactgtttctgcaagtcatgaaagaaagaagcctgttttc
aagattaaagtgaaaaaaactgttgcatcttctcaagccgaggatcatgaaaatgcaatg
atggacaaatctcatgatggttttcgtgatgttgaccgtggggcaagtagctcagtttct
gttgatgcacctcaaagaaatgttgttgaaatattgagcagtggtaacaaccaattccct
gaggatgtcaactcttgtcatgatgttggatctcatgttactgccagcattggaagtgtc
aaagttgcaatcgaaggtgaagagctaacgaaggagttgcaatgcaccgctgaatcaagc
aaggttcttttggtgccacaacctgatgatcacttatcgactggtatcacgagagttgat
gatcctgaggttgaaccacataaatatgcaagtttacatttgctgactatgcctaacctt
ccagttcacggcaaagttaaggagaagaagaaagacagaggaaagaaacgaaagctggag
gggcgcaaagatgacccagagtacttggaacggaagaggttaaagaaggagaagaaacgg
aaggagaaagagttagcaaagctcttgaaagacgaggcaaaggcttcaacgcccgtgggg
agtcagggaaagaatgagctgcgaggtacccaagcagagacaatcaggaatgatcatcag
acaagtttagtggagcaagaaagtagaaaagatgaggctgaactgagacaggtgatgaat
ggtgcagaggcaaaggcaacctcttcgggtttgtatagtaggaatgaggatattggggct
aaaggagcaagtgtgcaattgaaacccggcggctctagtggggtgaagttaaatgtagat
agaggtgacacaagtgtaaatgctgcgccacctacttcttcacataaacttaaaattagg
attaaaaaccgaacgcttggaaaatcatga
DBGET
integrated database retrieval system
