KEGG   Lycium barbarum (goji berry): 132633416
Entry
132633416         CDS       T09483                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
lbb  Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lbb03036]
    132633416
   03400 DNA repair and recombination proteins [BR:lbb03400]
    132633416
Chromosome and associated proteins [BR:lbb03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    132633416
DNA repair and recombination proteins [BR:lbb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     132633416
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ HEAT_2
Other DBs
NCBI-GeneID: 132633416
NCBI-ProteinID: XP_060205808
LinkDB
Position
3:complement(146215641..146231722)
AA seq 1142 aa
MSSGTPTIQYVTHIESYVSSSTSPAQQAASSDAIAVLLKNDLLSLEALVREMEMYLTTTD
SSIRSRGILLLGELLMRLVSKPLGDTAISSLLEFFAERLADWKALHGALVGCLALLRRKR
DTGMINKSQAKAVAESYLKNLQVQSLGLQDRKLCLQILECLLDRYQDALFSLGDDLVYGI
CEAIDGEKDPQCLMLLFHIVELLAQLFPEPSGPLVNYAGDLFDLLGCYFPIHFTHPKSDD
VDVKKGELSRALMLAFASTPLFEPTAIPLLLEKLSSSLPSAKVESFKYLSYCTLKYGGDR
MEKYTGSLWSALKDAIFTNPQSTLSVDSDPVDGLGFHESEIMTQALELLQVLVRQHNASF
LSLILGDGDISTFLNSFSQLDDFNNLSTQYKQRLHAVGRLLSVCIKSSASSCNKVFESFF
PRLVDALRLSVENSHETIHSALDANFNFGALYLCVEFLAACRQLVVSSHKVTSAPDLSRD
PWCQILRSFCTSLCNVFFCLIRASSSESTWNAYVYAAVKGLEILATFPGSFISVSKLMYE
NILLTLTSIIESDFNKKFLWKTALKALVEINLFVNKYHEDEKAASFNTIVRQKIVSLISS
DDLNMPQSLKLEAIFDIGVTGKSFMLSAVSELEKTISARLSEIFVCGDLRLAELTAGLLE
CYSNKVLPWFHCNGGVDEVSLNLAINIFSKMEKSTSLSLGAKGKELLDATMAAMKQSVAG
CSVESQEKVLQKAFDVMATSSFFVSKDLILGTDLFNKKTQLGQTSEGLSCRDEWITSLFA
SVVIALRPQTRIPNIRLLLQLLATTLLEGHIPSAQALGSLVNKLPLNISEDCSLEKVIDT
LFKNVMWCNISIGKEGNDGGAVDMSNLKLSSLNIHAVVGLAWIGKGLLMRGHEKLKDVTM
TFLNCLVSNGDHGNLLPFNDQMKDRAEQKVLCLRKSAADAFHILMNDSDACLNRNYHASI
RPLYKQRFFNIMMPMFLSAIVKCDSSTTRCFLYQAFVHLVSETPLAAVVGDAKKVVPVLM
DCFLILSKDVSHKEIIYSALIVLSGILTDKNGQEAIVENAPTVIRRLIELTSYPYMMQVI
RETAIQCLGAMSELPHARIYPMRTQVLQAITKALDDPKRVVRLEAVKCRLAWASMASRSI
HF
NT seq 3429 nt   +upstreamnt  +downstreamnt
atgtcttctggcactcctactattcagtatgtcactcacattgagtcctatgtcagctct
tccacctctcccgcacaacaggctgcaagcagtgatgcaattgctgttcttttgaagaat
gacctcttaagtttagaagccttggttagagagatggagatgtatttgactactacagat
agcagcattcgctcaagaggtatcctcttacttggagaactattgatgcgactagtatcg
aagccgttgggggataccgcaataagcagcttgttagaattcttcgcagagaggctggca
gactggaaagcgttgcatggtgcccttgtcggttgtttggctctactaaggaggaaaaga
gatactggtatgatcaataagagtcaagcaaaggctgttgcagagtcttatcttaaaaac
ctgcaggttcagtccttggggctgcaagacaggaagctttgccttcaaatattggaatgc
ctgttggatcgctatcaggatgcacttttttcactgggtgatgatctcgtttatggaatc
tgtgaagctattgatggtgaaaaggatccacagtgcttgatgctcttattccatatagtt
gaactgctggcacaattatttcctgaaccttctggtccattggtgaattatgcaggggat
ttgttcgaccttttgggatgttactttcctatccattttacccatcctaagagtgatgat
gttgatgtaaagaagggggaactctcaagggccctaatgctggcatttgcttcgacacca
ctttttgaacccacagccattccattacttcttgaaaaactgtcttcttctctgccgtca
gcaaaggtggaatcttttaagtaccttagctactgcacgttgaaatatggaggagataga
atggaaaaatacacaggatccctttggtctgcattaaaagatgcaatatttactaatccg
caatccactttgtcagtggattccgatccagtagatggattaggttttcatgagagtgaa
attatgacacaggcccttgaacttcttcaggtgcttgttcgtcagcataatgcttcattc
ttgagtttgattctgggtgatggggacataagcacatttctgaactccttttcccagtta
gacgattttaataatctttctacccaatacaagcagagattacatgccgttgggcgtctt
ctttctgtttgcattaaatcttcggcatcttcctgcaataaagtttttgaaagtttcttt
cctcggttggtggatgctttaaggctctcggttgaaaattcccatgagactattcattca
gctttggatgcaaactttaactttggggccttgtatctatgcgttgaattccttgctgca
tgcagacagctggtagtcagctctcataaagtcacttcagctcctgatctatctcgtgac
ccttggtgccagatacttcgtagtttctgcacatcattatgcaatgttttcttttgtctc
attcgcgcaagttcttctgaaagtacttggaatgcttatgtttatgcagcagttaaaggt
ttggagatcttggctacatttcctggaagctttatttcagtgtcaaagctcatgtatgag
aatatcttgctgactttgacgtcaatcattgaatctgatttcaacaagaagtttctatgg
aagacagcactgaaagcattagtggagatcaacttgtttgtcaataagtatcatgaggac
gagaaggcagctagctttaacactattgtcaggcaaaagattgtttctctgatttcttct
gatgacttaaatatgcctcaatcactcaaactggaggccatttttgatattggagtgact
gggaaaagtttcatgcttagtgctgtaagcgaattggagaagactatatctgcccgcttg
tctgagatttttgtctgtggagatctgcggttagctgaattgacagctgggcttttggaa
tgttattccaataaggtacttccatggttccattgcaatggaggtgtagatgaagtctct
ttgaatcttgcgattaatattttctctaaaatggaaaaaagcacatctttgagtctagga
gcaaagggaaaggaacttctggatgcaacaatggctgcaatgaagcaatctgtggcaggc
tgttcagtggaaagccaggaaaaggttcttcagaaagcttttgatgtgatggcaacaagc
tcctttttcgtttcaaaagatttgattctaggaaccgatctctttaacaagaaaactcaa
cttggtcagacttctgagggtttgtcatgtagagacgaatggattacttcactcttcgcg
tcagttgtaattgcgttgcgtcctcaaactcggataccaaatataagactgttattacag
ttgctggcgacgactctccttgaaggtcatattccctcagctcaggccctgggttctttg
gttaacaaacttcctctaaatatatcagaagactgcagtctcgaaaaagttattgacacg
ttgttcaagaatgtaatgtggtgcaacattagtattgggaaagagggcaatgatggtggt
gcggttgatatgagtaacctgaaactaagtagtctgaatattcatgctgttgttggatta
gcatggatagggaaaggtttgcttatgcggggtcatgagaagctaaaagatgtgactatg
actttcttgaattgcttagtttcaaatggagatcatggaaatttgctaccttttaatgat
caaatgaaagatcgcgctgagcagaaagtgctttgtctcagaaaatcagctgcagatgca
tttcatattcttatgaatgattctgatgcttgtttgaacagaaattatcatgcaagcatt
cgcccactctataaacaacggtttttcaacattatgatgcctatgttcttatctgcaata
gtaaaatgtgattcatccactacaaggtgttttctctatcaagcttttgtacacctggtg
tctgaaactcctcttgctgctgttgttggtgacgccaaaaaagtcgttcctgtacttatg
gattgctttcttatattgagcaaggatgtctctcataaggagataatttatagtgcctta
atagttctctctggaatattaacggataaaaatggacaagaagctatcgtagaaaatgct
cccacggtgatccgcagacttattgagctcacatcctatccttatatgatgcaggtgatc
cgagagactgcaatccagtgccttggtgccatgtcagagctgccgcatgcgaggatatat
cccatgagaacacaggtgttgcaagctataaccaaagctcttgatgatccaaagagggtt
gttcgtctagaggcagtcaaatgtcggctagcttgggcttcaatggcatcaaggagtatt
cacttctaa

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