Lycium barbarum (goji berry): 132633450
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Entry
132633450 CDS
T09483
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03015
mRNA surveillance pathway
lbb04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132633450
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
132633450
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lbb01009
]
132633450
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132633450
03036 Chromosome and associated proteins [BR:
lbb03036
]
132633450
Protein phosphatases and associated proteins [BR:
lbb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
132633450
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
132633450
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
132633450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ComGF
Motif
Other DBs
NCBI-GeneID:
132633450
NCBI-ProteinID:
XP_060205859
LinkDB
All DBs
Position
3:complement(146778027..146786416)
Genome browser
AA seq
515 aa
AA seq
DB search
MNGGDDVAATAGPPPPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKTGDHLATGDRGGR
VVLFERTDTKENIGSRRELERMDYSVGRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKI
RWCQSSNGALFLLSTNDKTIKFWKVQEKKVKKISDMNIDPSRAVGNGSVASSSVSSSPKQ
CLANWGYADRSLNCLSSDLSFPPGGFSSLRLPVVVTINETSLVARCRRVYAHAHDYHINS
ISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNTL
AYSSSKGSIRLIDLRQSALCDSHSKLFEEQEAPGSRSFFTEIIASISDIKFSKDGRYILS
RDYMTLKLWDINMDSGPVSTFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSY
SNLFRVFGCAAGTTEATTLEASKNPMRRQVQTPSRPSRSLSSSLTRVVRRGSESPGVDAN
GNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtggtgatgacgtggcagctacggcgggtccaccaccgccgcttgagtggaaa
ttctctcaggtatttggtgaacgtacggccggtgaagaagttcaggaagttgatatcatc
tccgcgattgagttcgataaaactggtgaccatcttgctactggagatcgtgggggtagg
gtggtattatttgaaaggactgatacaaaagagaatattggaagtcggagagagctagag
agaatggactattcagtgggtcggcatccagagttccgctacaagacagaatttcagagc
catgaacctgagtttgattatctgaagagtttggagattgaggagaaaatcaacaagatc
cgttggtgccaatcgtctaatggtgccctctttcttctatctaccaatgacaaaaccata
aagttttggaaggtccaagagaagaaagtcaagaagatatctgatatgaatattgatcct
tccagagctgttggaaatggcagtgtggccagttctagtgtttcttccagtccaaagcag
tgtcttgcaaattggggttatgcagatagatctttgaattgcttgagcagtgatttgtcg
tttccacctgggggcttttcctcattacgtttacctgtggtagttacaattaatgagacc
agccttgttgcaaggtgcagaagagtgtatgctcatgcacatgactatcacatcaactct
atttcaaataacagtgatggcgaaacatttatatcggctgatgatctccggatcaacctt
tggaacttggaaataagcaatcagagtttcaatattgttgatgtcaagccggcaaatatg
gaagatctaactgaggtgataacttcagcagagtttcatcctactcattgtaacacgtta
gcttatagtagttcaaaagggtcaattcgtctcatagatctccggcagtcagctttgtgc
gattcacattctaaattgtttgaggagcaagaagcacccggttcaagatcatttttcacc
gagataattgcttcaatttcagatattaaattttctaaggatggaagatacatactcagc
cgtgactatatgaccctaaagctatgggacattaatatggattctggtccagtatcaacc
ttccaggttcatgaatatttgagaccgaagctatgcgatttatatgagaatgactccatc
tttgacaagttcgagtgttgccttagtggtgatgggctgcgagtagctactggatcttat
agcaatcttttccgtgtctttggttgtgccgcggggactactgaagctactacactggaa
gctagcaaaaaccccatgagaagacaagtgcagactccttcaaggccttccaggtccctg
agcagtagcctaacacgtgttgtcaggagaggttcagaaagtccaggagttgatgcaaat
ggaaattcatttgatttcacaacaaagctcctccatctagcgtggcatccaactgaaaat
tcaatcgcctgtgccgctgcaaacagcttgtatatgtattatgcataa
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