Lycium barbarum (goji berry): 132633471
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Entry
132633471 CDS
T09483
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132633471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132633471
03110 Chaperones and folding catalysts [BR:
lbb03110
]
132633471
03029 Mitochondrial biogenesis [BR:
lbb03029
]
132633471
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lbb04147
]
132633471
Enzymes [BR:
lbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
132633471
Messenger RNA biogenesis [BR:
lbb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
132633471
Chaperones and folding catalysts [BR:
lbb03110
]
Heat shock proteins
HSP60 / Chaperonin
132633471
Mitochondrial biogenesis [BR:
lbb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
132633471
Exosome [BR:
lbb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132633471
Exosomal proteins of other body fluids (saliva and urine)
132633471
Exosomal proteins of breast cancer cells
132633471
Exosomal proteins of colorectal cancer cells
132633471
Exosomal proteins of bladder cancer cells
132633471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Flavoprotein
Motif
Other DBs
NCBI-GeneID:
132633471
NCBI-ProteinID:
XP_060205893
LinkDB
All DBs
Position
3:147202779..147209967
Genome browser
AA seq
612 aa
AA seq
DB search
MLTRNTENVEKSLSSLATSGSSIFHFLLLLDRQSLHIGAMFRAALAVASSIRSSTSRKLV
SSRVVSSRNYVAKDISFGNHARLAMLQGVNELAEAVKVTMGPKGRNVIIERSPGNPKVTK
DGVTVAKSINFKEKAKNVGADLVKQVANATNSVAGDGTTCATVLTQAIFIEGCKAVAAGV
SVMDLRTGINMAVDAVVADLKSRAVMISTPEEITQVATISANGECEIGELIARAMEKVGK
EGVITVADGNTLDNELEVVEGMKLGRGYISPYFVTDVKTQKCELENPLILIHDKKISDLN
SLVRILELALKRRRPLLIVAEDVESDALAMLILNKHRAGIKVCAIKAPGFGDNRRSNLED
LAVLTGGEVISAERGLDLNKVQIDMLGTAKKVTVSLDDTLVLHGGGDKKLIEERCEQLRI
AKEKSSAMFDKEKAQERLSKLSGGVAVFKVGGASEAEVGERKDRVTDALNATRAAVEEGI
VPGGGVALLYATKCLKGLQTANDGQRKGVEIIENALKAPTFTIASNAGTDGALVVGKLLE
QDDSNLGYDAAKGTYQHMVKAGIIDPVKVVRTALVDAASISLLLTTTEAAIVDRQGEINP
LANRMPNMGDMY
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgctaacacgaaacacagagaacgtagagaagtccctgtccagtcttgctacttccggc
agctccattttccatttcctcttacttttagaccgtcaatcgttacatattggggcaatg
ttcagagctgcattagctgttgcttcatcaatcaggtcctcaacttccaggaaattggtt
tctagtagggttgtttcaagcagaaattatgttgccaaagatatcagttttggtaaccac
gcacggttagccatgttacaaggagttaatgagcttgcagaagctgtaaaagtcactatg
ggaccaaagggtcgtaatgtaattattgagagaagcccagggaatcccaaggtcacaaag
gatggtgtcactgtagccaaaagcatcaactttaaggaaaaggcaaagaatgtgggagct
gatcttgtgaagcaggttgctaacgctactaattcagttgctggagatggtaccacctgt
gcaactgtgcttactcaggcaattttcatagaaggttgcaaagctgttgctgcaggtgta
agcgtgatggatttgcgtactggtattaacatggccgttgatgctgttgttgctgacttg
aaaagcagagccgtcatgattagcaccccggaggagattacacaggtagcaactatatct
gcaaatggtgaatgtgaaattggggaactaatagctcgagccatggaaaaagttgggaag
gaaggagtgattactgttgctgacggaaatacgttagataatgagttggaagtggtggaa
ggcatgaagcttggccgtggttatatatctccttattttgtcacggacgtgaagactcaa
aaatgtgaattggaaaatccattgatccttattcatgacaagaaaatctcagatttgaac
tcgcttgtgcggatattggagcttgctcttaagagaaggaggcctctgttaattgttgct
gaagatgtggaaagtgatgcattagctatgcttatcctaaacaagcatcgtgctgggatt
aaggtctgtgccattaaagctcctggttttggggataatagaagatccaacttggaggac
ctcgcagttcttactggaggagaagtcattagtgcagaacgcggtttagatctgaacaaa
gttcaaattgatatgcttggtactgctaaaaaggttactgtttcccttgatgacacctta
gttctgcatggaggtggggacaaaaagttaattgaagaaaggtgtgagcagctaagaata
gccaaggaaaagagtagtgccatgtttgataaggagaaagctcaggagcgtttgtcaaaa
ctatctggtggtgttgctgtgttcaaggttggaggggccagtgaggcggaagttggggaa
aggaaagatagggttacagatgccttaaatgcaacaagggctgctgtggaagagggcatt
gttccaggtggcggtgttgctctcctatatgcaaccaaatgtcttaaaggccttcagact
gcaaatgatggccaaagaaagggagtcgagatcattgagaatgctctcaaggcacctact
tttacaatagcttcaaatgccggcactgacggtgccttggttgtaggcaagctcttagaa
caagatgattcaaatctaggatatgatgctgctaaaggtacgtaccaacacatggtgaag
gctggaattattgatcccgtgaaagtagttagaacagcattggtggatgctgccagcatc
tctttgctattgacgacaactgaggctgccattgtggaccgtcaaggggagataaaccca
cttgcaaaccgcatgccaaacatgggtgatatgtactga
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