Lycium barbarum (goji berry): 132634230
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Entry
132634230 CDS
T09483
Name
(RefSeq) sm-like protein LSM7 isoform X1
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03018
RNA degradation
lbb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132634230
09123 Folding, sorting and degradation
03018 RNA degradation
132634230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132634230
03041 Spliceosome [BR:
lbb03041
]
132634230
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132634230
mRNA degradation factors
5'-3' decay
Lsm complex
132634230
Spliceosome [BR:
lbb03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
132634230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
132634230
NCBI-ProteinID:
XP_060206497
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All DBs
Position
3:complement(134437493..134438408)
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AA seq
126 aa
AA seq
DB search
MCQIFSFELRVYRKQSPRLTKIGVYRRMSGRKESALDLSKFIDKAVEVKLTGGRQVVGTL
KGYDQLLNVVLDEAIEHLRDSDDPLRSTDETRRLGLIVCKGSAVMLVAPEDGTDEISNPF
VQPNGA
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcaaatcttttcttttgagctgagagtctatcgaaaacaatctccccgcctcaca
aagataggagtctacagaagaatgtctggcagaaaagaatcagctttagatttgtcaaaa
tttattgacaaggctgtggaagtcaagcttactggtggaagacaagtggtaggaacacta
aaaggctatgatcagctgttaaatgttgtgttggatgaagccatagagcaccttagagat
tccgatgatcccctgaggagtaccgatgagacacgacgtcttggcttaatagtgtgcaag
ggtagtgcagtaatgcttgtggctccagaagatggtacagatgagatatccaatcctttt
gtccagccaaatggggcatag
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