KEGG   Lycium barbarum (goji berry): 132634230
Entry
132634230         CDS       T09483                                 
Name
(RefSeq) sm-like protein LSM7 isoform X1
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb03018  RNA degradation
lbb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132634230
  09123 Folding, sorting and degradation
   03018 RNA degradation
    132634230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lbb03019]
    132634230
   03041 Spliceosome [BR:lbb03041]
    132634230
Messenger RNA biogenesis [BR:lbb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     132634230
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     132634230
Spliceosome [BR:lbb03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    132634230
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-GeneID: 132634230
NCBI-ProteinID: XP_060206497
LinkDB
Position
3:complement(134437493..134438408)
AA seq 126 aa
MCQIFSFELRVYRKQSPRLTKIGVYRRMSGRKESALDLSKFIDKAVEVKLTGGRQVVGTL
KGYDQLLNVVLDEAIEHLRDSDDPLRSTDETRRLGLIVCKGSAVMLVAPEDGTDEISNPF
VQPNGA
NT seq 381 nt   +upstreamnt  +downstreamnt
atgtgtcaaatcttttcttttgagctgagagtctatcgaaaacaatctccccgcctcaca
aagataggagtctacagaagaatgtctggcagaaaagaatcagctttagatttgtcaaaa
tttattgacaaggctgtggaagtcaagcttactggtggaagacaagtggtaggaacacta
aaaggctatgatcagctgttaaatgttgtgttggatgaagccatagagcaccttagagat
tccgatgatcccctgaggagtaccgatgagacacgacgtcttggcttaatagtgtgcaag
ggtagtgcagtaatgcttgtggctccagaagatggtacagatgagatatccaatcctttt
gtccagccaaatggggcatag

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