Lycium barbarum (goji berry): 132635039
Help
Entry
132635039 CDS
T09483
Name
(RefSeq) deoxyribodipyrimidine photo-lyase isoform X1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132635039
Enzymes [BR:
lbb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
132635039
DNA repair and recombination proteins [BR:
lbb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
132635039
Prokaryotic type
132635039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
NNH2
Motif
Other DBs
NCBI-GeneID:
132635039
NCBI-ProteinID:
XP_060207231
LinkDB
All DBs
Position
4:7165759..7170903
Genome browser
AA seq
488 aa
AA seq
DB search
MASSIPVVQSGRIRVVKQGSGPLVGPVVYWMFRDQRIRDNWALIHAVDQANKANVPVAIA
FNLFDQFLGAKARQLGFMLRGLEKLHRDLENTLQIPFFLFQGQAVDTIPDFLKECGASLL
VTDFSPLRDVRSWKEKICERVGESVTVHEVDAHNIIPLWVASDKLEYSARTLRGKINKLL
PDYLIELPAIGPPKIKWSSSNPPIDWPKIIADVVRKGAEVPEIEWCEPGEDAALEVLMGS
KKGFLTTRLKNYSTDRNNPLKPQALSGLSPYLHFGQISAQRCALEAHKVRKHYTQAVDTF
LEEMIVRRELADNFCYYQPRYDSLLGAWEWARKTLMEHASDKREHIYTREQLEKAQTADT
LWNASQLEMVHHGKMHGFMRMYWAKKILEWTSGPEEALAITIYLNDKYHIDGRDPSGYVG
CMWSICGVHDQGWRERPVFGKIRYMNYAGCKRKFNVDGYISYVKRLVGESKKRKAEVFFD
KKAKELRS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttcgattccagttgttcagtcgggtcggatccgggttgtaaagcaaggatca
ggaccgttggttggaccagtggtatattggatgttcagagatcaacggataagagataat
tgggcattaatccacgccgttgatcaagctaacaaggccaatgtacctgtagctattgct
tttaatttgtttgatcagtttttaggtgcaaaagctagacagttaggttttatgcttaga
ggccttgagaaacttcaccgtgacctggaaaatactcttcaaattccattttttctattt
cagggacaagctgtagatacaattcccgattttctgaaagaatgtggagcttctcttcta
gtaacggatttctcacctttgagagatgttcggagttggaaagaaaaaatttgtgagagg
gtgggtgaatcggtaacagtacacgaggttgatgcacacaatattattcctctttgggtg
gcatcagataaattggaatacagtgctagaaccctacggggtaaaataaataagctgctt
ccggactatctgattgaattgcctgcaataggacctcccaagataaagtggtcttcctca
aatcctccaatagattggccaaaaataattgcagatgttgtaaggaaaggagcagaagtt
cctgaaattgaatggtgtgaaccaggtgaagacgctgcattggaagtgctaatgggaagt
aaaaaaggattcctgactaccaggttgaagaattattcaacggaccggaacaaccctctg
aaaccccaagcactttctggtctctctccttatttgcactttgggcagatatcagcgcag
agatgtgctttagaagcacacaaagttcggaaacattatactcaggcagttgacacattt
ctggaggaaatgattgtgcgcagagagcttgctgataacttctgctattaccagcctcga
tatgattcattactgggtgcatgggaatgggcacgtaaaaccttgatggaacatgcatct
gataagcgtgaacatatatacacgcgagagcaactggagaaggcacaaactgcagacact
ctttggaatgcttctcaattagagatggttcatcatggaaaaatgcatggttttatgagg
atgtattgggctaaaaagatactcgaatggacaagtggaccggaagaagctctggctatc
acaatatatttgaatgataagtatcatattgatggaagggatcctagtggttatgttgga
tgcatgtggtcaatatgtggagtacacgaccagggttggcgagagcgccccgtatttggg
aaaatcaggtatatgaactatgcaggttgcaagaggaaattcaacgtggatggatatatt
tcttacgttaaaaggctggtaggtgaaagcaaaaaaagaaaagcggaagtatttttcgac
aagaaggcaaaagaattgcgtagttag
DBGET
integrated database retrieval system
