Lycium barbarum (goji berry): 132635137
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Entry
132635137 CDS
T09483
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132635137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbb03041
]
132635137
Spliceosome [BR:
lbb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
132635137
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
132635137
NCBI-ProteinID:
XP_060207381
LinkDB
All DBs
Position
4:9291790..9301047
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AA seq
483 aa
AA seq
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MATLADSFLADLDELSDNEADVVDEENLDADQMEEDGDLADIEALNYDDLDSVSKLQKSH
RYIDIMQKVEDALEKESDITNKGVVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRDKY
RLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLP
EDVLQKTVEACDRALDLDSAKKKVLDFVESRMGYIAPNLSAVVGSAVAAKLMGTAGGLSS
LAKMPACNVQLLGAKKKNLAGFSTATSQFHVGYIEQTELFQSTPPSLRMRACRLLAAKST
LAARVDSINGDPIGKTGRSLREEIRKKIDKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLR
KMKERYAITDMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSKLAAKV
AKKFKEKNYGSSGATSGLTSSLAFTPVQGIELSNPQALANQLGSGTQSTYFSDTGTFSKI
KRT
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgctgattctttcctggcagatctggatgaattgtccgataatgaagct
gatgttgttgatgaggagaatcttgatgctgatcagatggaggaagatggagacttggca
gacatagaagcacttaattatgatgatctagatagtgtttccaagctgcaaaaatcacat
cgctacattgacataatgcagaaagttgaagatgctcttgagaaggagtctgatatcacg
aataaaggtgttgttctcgaagatgatccggagtatcagttgatagtagactgcaatgcc
ttatcagttgacattgagaatgaaatcgttataatccacaatttcatacgcgacaagtat
cgactgaaatttcctgagttagagtcacttgttcatcacccaattgattatgctcgggtt
gttaaaaagattggaaacgaaatggatctgactcttgttgacttggaaggtctgctaccc
tcagctatcatcatggttgtgtcagttacggcatcaactactagtggcaagccattgcca
gaagatgttttacagaagacagtggaagcatgtgatagagcccttgaccttgattcagca
aagaaaaaggttcttgattttgttgagagtcgaatgggatatattgctcccaatctttct
gctgtagttgggagtgcagttgctgcaaaacttatgggtactgctggtggtctctcatcg
ttggcaaaaatgcctgcttgtaatgtccagcttcttggtgccaaaaagaagaatctagca
ggtttctccacagcaacctcccaatttcatgtgggttatattgagcaaacagaattattt
cagagtacacctccttccttaaggatgcgagcctgtagactgctggcagcgaaatctaca
ttagcagcacgtgtggactcgatcaatggagacccgattggaaaaactggaagatctctt
agggaagagatccgtaaaaagatagataagtggcaagagccacctcctgctaagcagcca
aagcctcttccagtacctgattctgagcccaagaaaaagagaggtggccgtcggctgaga
aagatgaaagaaagatatgctatcacggatatgcggaagctagcaaacaggatgcagttt
ggaatacctgaagaaagctccttaggggatggactaggggagggctatggcatgcttggt
caagctggaagtggcaagttgcgtgtatcagtcggtcagagcaagcttgctgccaaagta
gcgaagaaattcaaggagaagaattatggaagcagtggtgctacatcaggcttgacttca
agtttggccttcactcctgtgcaagggatcgagctgtcaaatcctcaggcgcttgcaaat
caacttggcagtggaactcagagcacctatttctcggacactggaacgttttctaagatt
aagagaacatga
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