Lycium barbarum (goji berry): 132635237
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Entry
132635237 CDS
T09483
Name
(RefSeq) SUPPRESSOR OF ABI3-5 isoform X1
KO
K13094
RNA-binding protein 5/10
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbb03041
]
132635237
Spliceosome [BR:
lbb03041
]
Complex A
Other components
Complex A specific factors
132635237
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
OCRE
G-patch
G-patch_2
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
132635237
NCBI-ProteinID:
XP_060207529
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All DBs
Position
4:complement(12560193..12574136)
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AA seq
1043 aa
AA seq
DB search
MDPGRYGPHQGWENNSALEGYRGVHEPDFRAGGSYDDRRFVDDRFSRDGVYPRGAYHRDI
LEGEHYPHPPPAVGHWPQTRRRSYEEEYPVERDSRRHEKPYVDSYHEIREADKYHEINTF
RDGYRSFDNYPDAGFDRPARYGGREHDELYDDYDYRHRMAHPNREDSRERDYEYSRYSYE
SDYERGSRRDGNCRRRESRERERDKESSRERDPSPYKRHEHSRSRSRGHDDHLRSRSPRS
RSHSRSHREDSYDDGRYDRSERRRDRDDKRYHDNYSVAPSATVVVKGLSQKTTEEDLYQI
LAEWGPLRHVRVIKERNSGVSRGFAFIDFPSAGAAQAMMDKLGDEGLVVDGRKLFFEYSS
SKPTGGPGGLDSASRSNHGHHRSITVPSDWMCTICGCVNFARRTSCFQCNEPRTDDAPPA
DMASSNSSTLGRRGEAGPTHVLVVRGLDENADEEMLRYEFSKHAPIKDLRLVRDKFTHVS
RGFAFVHFYSVEEATKALEATNGTTLEKNGQILRVAYAKSILGPGSSGSQASSLAAAAIE
AATFAQQYDAVGWAPKEYNPDDKLSTGGQEHSGEVAGQNSAPSSGFVWDEASGYYYDAAS
GFYYDGNTGLYYDGNNGLWYSYDQKTQQYVPCTNQNESKAAAGPTETAKSSDGSNTKKVV
ISAPASTIAGEKAASLPDAIQAAASAAIAAEKKEKERAKEIKLASKSSILANKKKMSNVL
SMWKQRSHEGQAPRVALEDNQTAGEDRSNSVGPTAKAKLKAETLTTRENPTANSGLVGSS
TFQSVSSESQDRPRSLTNSSGGTLKGVIRGSGLGVVKSDTLYTGSSGSAPTSHSMPPTSG
PSSLTNADATAAPFRTDASALGAYTPPVPSGSKRRFSEMPSQPPPSIKEQSQTTYRDRAA
ERRSLYGSSSAFGDDASDHGDSNRDSTSRRGVFDPTPFPPGVGGGRSAEANSQSFEVISA
DRAIDESNVGNRMLRNMGWQEGLGLGKDGSGMVEPVQAQSTGHRAGLGSQPKKVVDPTLE
VQSGDSYKTLIQKKAIARFREMS
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggtcgatatggcccccatcaaggatgggaaaataacagcgctttggagggt
tatagaggagtgcacgagccagatttccgcgctggtggttcttatgatgataggaggttt
gtagatgatagattttcaagggacggtgtttacccacggggcgcctatcaccgtgatata
ctggaaggagagcactaccctcatccgccaccagcagttggacattggcctcaaacaagg
agaagaagttatgaagaagagtaccctgtggagagggattccaggaggcatgagaagccg
tacgttgattcatatcacgaaattcgtgaagctgataagtatcatgagattaacacattc
agagatggttatcgcagttttgacaactaccctgatgctggatttgacaggcctgctagg
tatgggggacgggagcatgatgaactctatgatgattatgactacagacatcgtatggcg
caccccaacagggaggatagccgtgaaagagactacgagtacagcagatacagttatgaa
tcagactatgaacgaggcagtaggagagatggtaattgcagacgacgtgaatcccgcgag
cgcgaacgtgacaaagaatcgagtcgtgagagggatccgagtccatataaaaggcacgag
cattcccgttcacgttctcgaggtcatgatgatcacctgaggtcaaggtctcctcgaagt
cgaagtcatagtcgcagtcatagagaagacagttatgatgatggccgatatgatagaagt
gagagacgaagagatcgtgatgataaaagataccatgacaattattctgtggctccttca
gcaactgttgttgtcaaaggtctttcacagaaaactactgaagaagatttgtatcagatc
cttgctgagtgggggcccctacgccatgttcgtgtgatcaaagaacgaaattctggcgtt
tctcgtggttttgcttttattgatttcccttctgcgggtgcggcgcaagcaatgatggac
aaacttggggatgagggtctagttgtggatggtaggaagctttttttcgagtacagcagt
agcaagccaactggagggcctggtggtctagacagtgcttcaagatctaatcatggtcac
catcggagcatcactgttccatctgattggatgtgcaccatctgtggatgcgtgaatttt
gcacggcgaacatcttgcttccagtgtaatgagccacggacagatgatgctcctccagca
gacatggcatcatccaactctagcactctggggaggagaggtgaagcaggtcccacacat
gtcttggttgtccgtggattagatgaaaatgcagatgaggaaatgcttcgttatgaattt
tccaaacatgctcctattaaggatcttcgtcttgtcagagacaagttcactcacgtctcg
aggggatttgcttttgtgcacttctattcggtggaggaagctactaaagctcttgaagca
acaaatgggacaactttagagaagaatgggcagattcttagagttgcgtatgcaaaaagc
atcctaggaccgggatcaagtggttctcaggctagtagccttgctgctgctgctattgaa
gcagcaacttttgctcaacagtatgatgctgttggatgggcaccaaaagagtataatcct
gatgataagttgtctactggtggacaagagcacagtggagaagttgctggtcaaaattct
gctccatcatctggatttgtctgggatgaagcctctgggtattattatgacgccgcttct
ggtttttattatgatggaaatacagggttgtattatgacggtaacaatggactctggtat
tcttatgatcagaagactcagcaatatgtaccctgcacaaatcagaatgaaagcaaagca
gcagcaggaccaactgaaactgccaagtcatcagatggctcaaacactaagaaagtcgtt
atatctgcaccagcttctacaatagctggtgagaaggctgcctcactaccggacgctatc
caggctgctgcctctgcagcaatagctgctgaaaagaaagagaaggagagggcaaaagag
ataaaacttgcgtcgaaaagcagtatccttgccaataagaagaaaatgagtaatgtattg
tcaatgtggaagcaaagaagtcatgaaggtcaagccccccgtgtggcgcttgaagacaac
cagaccgcgggtgaagacagatctaactcagtaggacccactgcaaaggctaagttaaaa
gctgagaccttgacgactagagagaatcctacagccaattcaggacttgtaggaagctca
acttttcaatctgtgagttctgagtctcaggataggcctaggtctctgactaacagctct
gggggcactctaaagggtgtcataagaggttctggtttaggggtggtgaaatcagatact
ctatatacaggatcatctggaagtgcacccacgtcacactccatgccaccaacctcaggt
ccatcttcattaacaaatgcagatgccactgcagcaccctttaggactgatgcatctgca
ttgggtgcgtatacacccccagtaccatctggtagtaaaagaaggttctcagagatgcca
tcacagcctcctccgtctatcaaggaacagtctcaaactacataccgagatcgtgctgct
gagaggaggagcttatatggttcatcttcagcttttggagatgatgcatcagatcatgga
gattcaaatcgggattcaacatccagaagaggtgtttttgatccaactcctttcccgccc
ggtgttggaggtggacgtagtgcggaagcaaatagtcagagctttgaggttatcagtgct
gacagggctatcgatgagagtaatgtgggcaatcgtatgctccgcaacatgggatggcag
gagggcttgggattggggaaggatggaagtggtatggtagagccagtccaagctcaaagc
actggacatagagccggactgggaagtcagcccaagaaggtggtggacccaacccttgaa
gtacagtctggtgacagttacaagacactcatacaaaaaaaggctatagctaggttcaga
gagatgtcataa
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