Lycium barbarum (goji berry): 132635286
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Entry
132635286 CDS
T09483
Name
(RefSeq) transcription factor MYC2
KO
K13422
transcription factor MYC2
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb04016
MAPK signaling pathway - plant
lbb04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
132635286
04075 Plant hormone signal transduction
132635286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lbb03000
]
132635286
Transcription factors [BR:
lbb03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
132635286
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
Bap31_Bap29_C
PUMA_CC
bHLH_INO4
bHLH_SAC51
Troponin
DMPK_coil
Motif
Other DBs
NCBI-GeneID:
132635286
NCBI-ProteinID:
XP_060207598
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All DBs
Position
4:complement(14244107..14246576)
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AA seq
664 aa
AA seq
DB search
MTEFSLPTMNLWNNSTTDDNVSMMEAFMSSDLSFWATTPGANSNPLPINNNNTPSTTLPP
SSSTSTITASAVDASKSMPFFNQETLQQRLQTLIDGARETWTYAIFWQSSAVDFSSPSVL
GWGDGYYKGEEDKAKRKLPVSSPAYIAEQEHRKKVLRELNSLISGTQTGTDDAVDEEVTD
TEWFFLISMTQSFVSGSGLPGQALYSSNPIWVAGAEKLAASHCERVRQAQGFGLQTMVCI
PSANGVVELGSTEVIIQSSDLMNKVRVLFNFNSDLGSGSWAVQPESDPSALWLTDPSSSA
MEVRESINTVQTNSVPSSNSNKQIAFGNENGQSSYNQQQTTHGFFSKELNFSEFGFDASS
NRNGNGNSSLSCKPESGEILNFCDSTKKSATSANGNLFSGQSQFGAGEENNKNKKRSATS
RGSNEEGMLSFVSSGMKSGGGGGEESDHSDLEASFVKEADSSRVVEPEKRPRKRGRKPAN
GREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKSKLQNTE
SDKEDMKSQVEDLKKELASKDSRRPGPPPPNQDLKMSSHNGSKVVDLDIDVKIIGWDAMI
RIQCNKKNHPAARLMAALMELDLDVHHASVSVVNELMIQQATVKMGSRHFTEEQLRIALT
SRIA
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgactgaattcagcttacccaccatgaatttgtggaataatagtactactgatgataac
gtttctatgatggaagcttttatgtcttccgatctttcattttgggctactactcctggt
gctaattcaaatcctcttcctattaataataataataccccatctactactcttcctcct
tcttcttcaacttccactataaccgcttcggccgttgatgcttcgaaatccatgccgttt
ttcaaccaagaaacgcttcagcagcgtcttcaaaccctaatcgacggtgctcgtgagacg
tggacctacgccatcttctggcagtcgtctgccgttgatttctcgagcccgtccgtgttg
ggttggggagatgggtactacaaaggcgaagaagataaagccaagaggaaactacctgtt
tcttctcctgcttatattgctgagcaggagcatcggaagaaggttctccgggagctgaat
tctttaatttccggaacacaaaccggaaccgatgatgctgtagatgaagaagttaccgac
actgaatggttctttcttatctccatgactcaatcgtttgtcagcggaagtgggttaccg
ggtcaggctttgtacagttcgaacccgatttgggttgccggagcagagaaattagctgct
tcacactgcgaacgggttcgtcaggctcaaggatttgggcttcaaaccatggtttgtatt
ccttcagctaatggtgtggttgaattgggctcaacagaggttataatccagagttctgat
ctcatgaacaaggttagagtattgtttaacttcaatagtgatttgggctcaggttcatgg
gctgtgcagcccgaaagcgacccgtcggcgctctggctcactgatccatcttcctcagct
atggaagttagagagtctataaatacagttcaaacaaattcagttccatcaagtaatagt
aataagcaaattgcctttggaaatgaaaatggtcaaagttcttacaatcagcaacaaaca
acacacggatttttctctaaggagttgaatttttcggaattcgggtttgatgcaagtagt
aataggaatgggaatggaaattcatcgctctcttgcaagcccgaatcgggtgaaatcttg
aatttttgtgatagtactaagaaaagtgctactagtgcaaatgggaacttgttttcgggt
cagtcccaatttggggctggggaggagaataataagaacaagaaaaggtcagctacttct
agaggaagcaatgaagaaggaatgctttcatttgtttcttccggtatgaaatccggcgga
ggcggaggtgaagagtctgatcattctgatctcgaggcctcgttcgtgaaagaagctgat
agtagtagggttgtagagcctgaaaaaaggccgaggaaacgaggaaggaagcccgctaat
ggacgggaagaacctttgaatcacgtcgaggcagagaggcaaaggagggagaaattgaac
caaagattctacgcgcttagagctgttgtcccaaatgtgtccaagatggacaaagcatcg
cttcttggtgatgcaatttcatatataaacgagctgaaatcgaagcttcaaaatacagag
tcagataaagaagacatgaagagccaagtagaagatttaaagaaagaattagcgagtaaa
gattcaagacgccctggtcctccaccaccaaatcaagatctcaagatgtctagccataat
ggaagcaaggttgttgacttggatatagatgttaagattattggatgggatgcgatgatt
cgtatacaatgtaataagaagaatcatccagctgcaaggttaatggcagcgctaatggaa
ttagacctagatgtgcaccatgccagtgtttcagtggtgaacgagttgatgatccagcaa
gccacagtgaaaatgggtagccgacatttcactgaagagcagcttaggatagcattgaca
tccagaattgcttaa
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