Lycium barbarum (goji berry): 132635288
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Entry
132635288 CDS
T09483
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 20-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lbb01002
]
132635288
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132635288
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132635288
Peptidases and inhibitors [BR:
lbb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
132635288
Ubiquitin system [BR:
lbb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
132635288
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF3501
Motif
Other DBs
NCBI-GeneID:
132635288
NCBI-ProteinID:
XP_060207600
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All DBs
Position
4:14294741..14300666
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AA seq
715 aa
AA seq
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MKNHCSETLGSDTKPVNLVDSDETLDKSNKSGELYMEEEELDASPVRAYTRYFQSRWAQP
WGKVTHPKPLYTQQTAPKPPSPQQAAAKPNDDEPSPQADAKPKDDEPSPSDWTQQAANEP
SPFDWTDGSPENKELAPLEPKWNFSHIDEEPKSMLGAGLSNLGNTCFLNAVLQSFMHTVS
LIQGLKSSDHATPCDGYLKGFCVICALRKLIDASLFSEAGVVSPWKFVNNLNYFSSTFRR
FQQEDAHEFLQCFLDKLERCCDDSRPKDCPILEADNIVKQAFGGRLVSKLWCCNCGHSSD
TFEPLIDLSLEIEDVDSLDTALESFTKVEKIEDSEIKFTCEKCKEQVSIEKQLVLDKAPS
VAALHLKRFKTDGSLVEKIDKYVSFPLELDLHTYADNNQIDNEELKYDLYAVIVHIGFSY
SSGHYYSFIRSAPNEWYKFDDSKVVRVREDYVLSQEAYVLFYAKRGTPWFSDFIDGLKPF
IDPSIWNTSPKSVLENTDAVSETSPRLPSAQAFCVKESNDAANESSPNSLKKVQDSKGKE
NMQMMSASRPPLRASNILDSKSPELDKVSLPSVLKENRSALDPVSTSRTLYITPETPPRS
PSPEIYREDPPDNDYHIPRGHLRTAGQVSCKKQLQKELEQDMERKQACSLIKKNMRGSRA
QQLLSAMRGSQSEGSATKRRRRMEVSPTRDDSNSTSRRRSSFGSTLRTVMAGSMR
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcattgctcagaaaccctaggaagtgacactaaaccagttaatttagtagat
tctgatgaaaccctagataaatcgaacaaatcgggagagttatatatggaggaagaagaa
ttggatgcatcacctgttcgtgcatacactcggtatttccaaagccgttgggctcaacct
tggggtaaagtcactcatcccaagcctctctatacgcaacaaactgcacccaagccgcca
tcgccacaacaagctgctgccaagcctaacgatgacgagccatcgccacaagctgatgcc
aagcctaaggatgacgagccatcgccttccgattggacacaacaagctgctaacgagcca
tcgccttttgattggacggatggatctccggaaaataaagaattggcaccacttgagcct
aagtggaatttttctcatatagatgaggaacctaagtctatgctgggtgcagggctttct
aatttgggaaatacatgctttctaaatgcggttctgcaatctttcatgcacacagtgtct
ctgattcagggccttaagtcgagtgatcatgctacaccatgtgatggttacctgaagggt
ttttgtgtaatttgtgcgttgaggaagcttattgatgcttcactgttttccgaggctggt
gtagtctctccatggaaatttgttaacaatttgaactatttttcttccactttccgtcgg
ttccaacaggaagatgctcatgagtttctacagtgttttctggataaacttgaaagatgt
tgtgatgattcaagaccaaaagactgcccaattttggaggctgacaacattgtgaagcag
gcttttggaggtcgtttagttagcaaattgtggtgttgtaattgtggccactcttctgac
actttcgagcctctaatagatctgagtttggagattgaggatgttgacagcctagacaca
gctctggagtctttcacaaaggttgagaaaattgaggattcagaaataaagtttacatgt
gaaaaatgtaaggagcaagtctccatcgagaagcagcttgtgctggataaggccccttct
gtcgctgcccttcatttaaagagattcaaaacagatggttctcttgttgagaagattgac
aaatatgtctcatttcctctggaattggacttgcatacttatgctgataacaaccaaatc
gataatgaagaactgaagtatgatctttatgcagttatagtgcatataggattttcatac
agttctgggcattattacagcttcattcgctctgctccaaatgagtggtacaaatttgat
gactcaaaggttgttcgggttcgagaagattatgttttgtcacaggaagcatacgttcta
ttttacgcaaagaggggcactccctggttttcagattttattgacgggctaaagcccttt
atagatccgtcaatatggaatacttctcccaagtctgtcttagagaatacagatgctgtc
tccgaaacttctccgcgtctaccgagtgcccaggctttctgtgtgaaagaatccaatgat
gctgcaaatgagtcatctcccaattctctcaagaaggttcaggatagtaaaggaaaggaa
aatatgcagatgatgtctgcttctagaccaccattacgtgcaagtaatattctggattcc
aagtcacctgaattggataaagtgtctttaccttcagtactcaaagaaaaccgcagtgct
ctggaccctgtttcaactagcagaactctatatatcacacccgaaacaccacctagatcc
ccaagcccagagatatacagagaagatcccccagataatgattaccatattcctcgtggc
catctaagaacggcaggccaggtatcttgcaaaaagcaactgcagaaggagcttgaacag
gacatggaaagaaagcaggcgtgttctctgataaagaaaaacatgcgtgggtctagagcc
cagcaactactatctgcaatgagaggctcacaaagtgaaggttccgctaccaagaggagg
agaaggatggaagtatctccaactagagacgacagtaattccaccagtcgccgaaggtct
agctttggctctacgttgcgtactgtaatggctggcagcatgagataa
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