Lycium barbarum (goji berry): 132635419
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Entry
132635419 CDS
T09483
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03030
DNA replication
lbb03420
Nucleotide excision repair
lbb03430
Mismatch repair
lbb03440
Homologous recombination
lbb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132635419
03420 Nucleotide excision repair
132635419
03430 Mismatch repair
132635419
03440 Homologous recombination
132635419
03460 Fanconi anemia pathway
132635419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lbb03000
]
132635419
03032 DNA replication proteins [BR:
lbb03032
]
132635419
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132635419
Transcription factors [BR:
lbb03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
132635419
DNA replication proteins [BR:
lbb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
132635419
DNA repair and recombination proteins [BR:
lbb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
132635419
MMR (mismatch excision repair)
132635419
DSBR (double strand breaks repair)
HR (homologous recombination)
132635419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
zf-CCHC
zf-CCHC_3
DUF223
DUF936
Motif
Other DBs
NCBI-GeneID:
132635419
NCBI-ProteinID:
XP_060207784
LinkDB
All DBs
Position
4:complement(17420808..17424672)
Genome browser
AA seq
861 aa
AA seq
DB search
MPPVNLTEGAIPMLSNGEWQENEFQPVLQITDVRLVNTQNQSNTNERYRILISDGQYIQQ
GMLATQKNQLIRSKQIQKGSIIQMKDFVRNVIQNRVIIIIIELDVLVEVCDQIGEPKHYL
KTDGSTPPVPRPAAQVQPSANQFVGVSGNSQSFPAVSATSVSTPRPNMTGGVQSPETNRS
SVYSTPSVGNLDSGRYGSSAPLYPRAESGPAISRAPVNYVRPPQPSYQQPPQSSYQQPPP
MYSNRGPIAKNDAPPRIVPIAALNPYQGRWTIKARVTAKAELRHYNNQRGDGKVFSFDLL
DSDGGEIRVTCFNSVADQFYHQIEPGRVYLISKGSLRPAQKAFNHLPNDHEIMLETTSVV
QPCFEDDRTIPQHQFHFRPISDIEAMENNNVIDVIGVVSSISPSTSIMRKNGTETQKRAL
QLKDMSGRSVELTLWGNFCNAEGQTLQNMCDSGAFPVLAVKAGRVNDFNGKSLGTISTSK
LFIEPDFPEALKTKEWFEREGKNVPSMSLSREVSSIGRTDVRKTISQIKDERLGTSEKPD
WITISATVTFIKVDNFCYTACPLMIGDRQCNKKVTNNGDGKWRCDRCDQTVDECEYRYIL
QFQIQDHTGLTWVTAFQECGDQIMGISAKELYFIKYEEQDDDRFAETMRNVLFNKFIFKL
KVKEEMFSDEQRVKSTVVKAEKLNFQSETKFLLDLIDKINGQESSTLPPMTDNATPRSGF
NNAGFGSKLKELMNPITSYGGSNSSISRESGLQGNRPTGSQFAPTGSSTGMYMSCNSCGG
TGHSASNCPSVMSGQSQAYGGGFGNRATSGISSGGASGECYKCHQFGHWARDCPGVSNAS
SVNNMTPGRYGNTPRQHVGGF
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgccgccggtaaacttaacggaaggagcgataccgatgttatctaacggtgaatggcaa
gaaaatgagtttcaaccggtgttacagatcacagatgttcggttagttaacactcagaat
cagagtaatactaatgaacgttacaggattttgatatccgatggacagtatatacagcaa
gggatgttagctacgcaaaagaatcaactaattaggtctaaacagattcagaaaggaagt
attattcagatgaaagatttcgttcgtaatgtcatccaaaatcgagtgatcattattatc
attgaattggatgttttagttgaggtgtgtgatcaaattggagagccaaagcattatctc
aaaactgatggtagtactcctccagtgccacggccagctgcccaagtgcagccttccgcc
aatcaatttgtcggtgtaagtggaaattctcaatcatttcctgctgtttcagctacttca
gtctcaactccaagaccaaatatgactggaggggtgcaatctccagagacaaaccgtagc
agtgtttacagtactccctctgttgggaatttggactctggacgatatggttcaagtgca
cctctttaccccagagcagaatctggtcctgcgatttcacgggctccagtgaattatgtg
cggccgccacagccttcttatcagcagcctcctcagtcttcttatcagcagccaccaccg
atgtactcaaacagaggacctatagccaagaatgatgcacctccgaggattgttccaatt
gctgctctcaatccatatcagggtcggtggactatcaaggccagggtaaccgcaaaggct
gaactcagacactacaacaatcaaaggggtgatggaaaagtattctcttttgatcttctt
gattctgatggaggagaaataagggtgacctgttttaactctgtagctgaccaattttac
caccagatcgagccaggtagagtttatctaatttcaaaaggaagcttgagaccagcgcag
aaagctttcaatcaccttccaaatgatcatgaaattatgcttgagaccacatctgtagtt
caaccttgttttgaggatgacaggactatacctcagcaccaatttcattttcggccaatc
agtgatattgaagccatggagaacaacaatgtgatagatgtgattggtgtggtgtcttca
ataagtccatctacttcaataatgaggaaaaatggtacagaaactcagaaaagagccctc
cagctgaaggacatgtctggcagaagtgttgaattaactttgtggggaaatttctgcaat
gcggaaggtcaaacacttcagaatatgtgtgattctggggctttccctgttttagcagtc
aaagctggtagagtaaatgattttaatggcaaatctttaggtactatatctacaagcaag
ttgtttatcgaaccagattttcctgaagctctgaaaacaaaggaatggtttgaaagggag
ggaaagaacgtgccgtcaatgtcactgtcacgagaagtcagcagcattggtcggacagat
gtgcggaaaactatatctcaaatcaaagatgaacggttgggcacttctgagaaaccagat
tggatcactataagtgccactgttacatttataaaggttgacaatttttgctatactgca
tgtcccctcatgataggagatcgacagtgcaacaaaaaagtgacaaataatggggatggg
aaatggcggtgtgacaggtgtgatcagactgttgatgaatgtgaatataggtacatcctc
cagttccagattcaggaccatactggcttaacatgggttactgcatttcaagaatgcggt
gaccagatcatgggtatatctgcaaaagaattgtatttcataaaatatgaggagcaggat
gatgataggtttgcagaaaccatgcgtaatgttttattcaacaagtttatatttaaattg
aaagtgaaagaagagatgtttagtgatgagcagcgagttaagtcaacagtggtcaaagct
gagaagctgaacttccaatcagagaccaagtttctgttggacttgatagacaagatcaat
gggcaggaatcgagcactctacctcccatgacagataatgcaactccaaggtcagggttt
aataatgctggatttgggagtaaactcaaagaactgatgaaccccattacaagctatggt
ggcagcaatagcagtatcagcagagagagtggactgcagggaaatcggcctactggctcg
cagtttgctccgactggttcttctacaggcatgtatatgagctgtaatagttgtggtgga
acgggccatagtgcctcaaactgtccaagcgtcatgagtggtcagagccaggcatatgga
ggtggttttggcaatagggcaacttcagggatcagcagtgggggtgcttccggtgagtgc
tataaatgccatcagtttggacattgggcaagagattgcccaggtgtaagcaatgcatct
tctgtcaataacatgacacctggaagatacgggaatactccaaggcaacacgttggcgga
ttttga
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