Lycium barbarum (goji berry): 132635558
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Entry
132635558 CDS
T09483
Name
(RefSeq) TATA-binding protein-associated factor BTAF1 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbb03021
]
132635558
Transcription machinery [BR:
lbb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
132635558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TOR1L1_N
HEAT_ECM29
HEAT_EZ
HEAT_2
TPR_Trm732_C
Motif
Other DBs
NCBI-GeneID:
132635558
NCBI-ProteinID:
XP_060207972
LinkDB
All DBs
Position
4:22945503..22990211
Genome browser
AA seq
2065 aa
AA seq
DB search
MAQQQSSRLNRLLTLLDTGSTQATRLSAARQIGEIAKSHPQDLNSLLSKVSQYLRSKKWD
TRVAAAHAVGSIAENVKHTTLAEHCSSVEGKMSEAGISGNVEELVAWPKCYPKIGGTSFR
SFELNKVLEFGALLASAGQEYDIPTDNSKNPRERLARQKQNLRRRLGLDVCEQFMDVNEM
IRDEDLIMQRANSPGNGVAAQYYSSRPVSNIRHFVANMVPSVRSRRPSARELNLLKRKAK
ISSKDQTKGWNKDGDTEAPQSQDIISPRGMGPDMSSSNKLLGENISDEDGLEYDGDKIWP
FQSFVEQLILDMFDPLWEVRHGSVMAMREILTHQGANAGVIIPDLRCDSALNIKIKERVD
KNTVKRERPIDLRVDDNTVKRERPIDLNMQVPPDELESVSKKLKVEPEVASYLAMDTMVC
TSMDGDPGSVSVKVEDAGLSLAVVQANGEFSVGSVKPETQSHLSGGSLGSDMSEEKGGGV
DKTSMEKTGNLENLPENCELMNLVKLARHSWLKNCEFLQDCAIRFLCVLSLDRFGDYVSD
QVVAPVRETCAQALGAVLKYMHPTLVHETLNILLQMQRRPEWEIRHGSLLGIKYLVAVRQ
EMLTELLGCVLPACKAGLEDPDDDVRAVAADALLPTAASVVALNGQLLHSIIMLLWDILL
DLDDLSPSTSSVMNLLAEIYSQEQMIPKAFGEKKKFDLNEIDRQDDLGEGIWSSENPYML
STLAPRLWPFMRHSITSVRYSAIRTLERLLEAEYKRSIAESSSSFWPSFILGDTLRIVFQ
NLLLESNEEIVQCSGRVWRILLQCPVEDLEDASKAYFSSWLELATTPYGSSLDTAKMFWP
VALPRKSHFKAAAKMRAVKSENDSLKSICSDSGEGTTVVEKSGEASTSSGKIVVGADVDM
SVTYTRVVTATVLGALASRLREGSLKFFIDPLWKALTSLSGVQREVASMVLISWFKELKT
RNILDMDGVVAGISSNFRSWLLDLLGCTNPAFPTKDSLLPYIELSRTYDKMRNEARQLYL
VTESSDMFKDLLSSTPVDLDNLSADDAMNFASKLQFSSINTGGEESAEQNSLDELETFKQ
RLLTTSGYLKCVQNNLHVTVSSLLAAAVVWMNELPVKLNPIILPLMASIKREQEEILQSK
AAEALAELIYRCMGRKPGPNDKLIKNLCSLTCMDPCETPQAGILNSIEIIEEHDLLSSGS
SSNRHKSKVHMLSPGEDRSKVEGFISRRGSELALKFLCEKLGGSLFEKLPKLWDCLVEVL
KPCNLEGMTAEDERLITQAIELVKDPQNLINNIQVVRSIAPLLDETLRPKLLTLLPCIFR
CVRHSHIAVRLAASRCITTLAKSMALDVMGSVIENVVPMLGDVTSVHSKQGAGMLVSLLV
QGLGIELVPYAPLLVVPLLRCMSDSDHSVRQSVTHSFATLVPLLPLARGVSPPVGLSEHL
SRSQEDVKFLEQLIDNSHIDDYKLSTELKVTLRRYQQEGINWLAFLKRFSLHGILCDDMG
LGKTLQASAIVASDVAEHIALNSSQELPPSLIICPSTLVGHWVYEIEKFIDGSLLTTLQY
VGSAQERISLRSQFKQHNVIVTSYDVIRKDVDYLRQLFWNYCILDEGHIIKNSKSKITVA
VKQLKAQHRLILSGTPIQNNVLDLWSLFDFLMPGFLGTERQFHASYGKPLLAARDPKCSA
KDAEAGVLAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSH
VRQEISSMVKHNESDASQKNDLPKASSHVFQALQYLLKLCSHPLLVFGERVSESLSSIVS
DLFSPGADIVSELHQLHHSPKLVALQEILSECGIGVDSGSEGPIGVGQHRVLIFAQHKAL
LDIIERDLFQNHMRNVTYLRLDGSVEPEKRFDIVKAFNSDPTIDALLLTTHVGGLGLNLT
SADTLVFMEHDWNPMRDHQAMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQRFKVSVAN
AVINADNASLKTMNTDQLLDLFTSAESKKGAGRSKRTDENSDVDSILPRNGKGLKAILGG
LEELWDQSQYTEEYNLGQFLAKLNG
NT seq
6198 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagcaatcgtcgcggcttaatcgcctgcttactttattagacactggctcg
actcaggcaacaagattgtcggcagctaggcagattggtgaaatagccaaatcacatcct
caggacctgaactctttgttgagtaaggtttcacaatatcttaggagtaaaaagtgggac
accagagttgctgctgctcatgccgttggatcaattgctgagaatgttaaacatacaact
ctggctgaacactgttcatctgtagaggggaaaatgtctgaagcaggaatctcaggcaat
gttgaagaattggtagcttggcctaaatgttatcctaaaataggagggacctcatttaga
agttttgaattgaacaaagtgctagagtttggggctctattggcatctgcaggacaggag
tatgatattcctactgacaatagcaagaatccaagggagcggttggcccgccagaaacaa
aacctgcgacgtcgtttgggattagatgtgtgcgaacagttcatggatgtcaatgaaatg
ataagggatgaggacctgatcatgcagagagctaattctccaggaaatggtgttgctgct
caatattattcatcgaggccagttagcaatatccggcattttgtcgcaaatatggtacca
agtgtcagatctcggaggccaagtgcacgggaattgaatctgttgaagcggaaagcaaaa
ataagctcaaaggaccaaacaaaaggatggaataaggatggagatacagaagctccacaa
tcacaagatataatatctcctaggggcatgggtcctgacatgtcaagctctaataagcta
cttggtgaaaacatctctgatgaagatggtctagagtatgacggagataagatttggcca
tttcagagttttgttgagcaactcatccttgatatgtttgatcctttatgggaggttcgt
catggcagtgtcatggctatgagagagatcttaactcatcaaggtgctaatgcaggagtt
attattccagacttgagatgtgatagtgcattaaatattaaaataaaagagagggtagac
aagaatactgtcaaaagggagaggccaattgatctgagggtagacgacaatactgttaaa
agggagaggccaattgatctgaatatgcaggttccacctgatgagttagagtcagtttcc
aagaaactgaaggttgaacctgaagttgcatcgtatttggcaatggatacaatggtctgt
accagcatggatggtgatcctggcagtgttagtgtaaaagtggaagatgctggattgagt
ttggcggttgtacaggcaaatggtgaatttagcgttggttctgttaagccggagactcaa
tctcatctcagtggtggaagcctgggtagtgatatgtcagaggagaagggaggtggcgtg
gataagacttctatggaaaagacgggtaatctagaaaatcttcctgagaattgtgagctg
atgaacttggttaaactggctaggcactcttggctcaagaattgtgaatttcttcaggat
tgtgctattcgtttcttgtgtgtcttatcattggatcgttttggagactatgtatcggat
caagttgtggctcctgttcgtgagacttgcgcacaagctttaggcgctgtgcttaagtac
atgcatcctactctagttcacgagacactgaatatcttgttacagatgcagcgtagaccg
gaatgggagattcgtcatgggagtcttttggggatcaaatatctagttgccgtgcggcag
gagatgcttactgagttgcttggctgtgttctcccggcatgtaaagctgggctcgaagat
cctgatgatgatgtgagagctgttgcagcagatgctttattacccactgcagcgtctgtt
gttgctttaaacggtcagctgttgcattctataatcatgttgctttgggatattttgctt
gacttggatgatctaagtccatctacgagcagtgtgatgaatctgttggcagagatctac
tctcaggagcaaatgattcccaaagcttttggggagaaaaagaaatttgatctcaatgaa
attgatcgacaagatgaccttggggaagggatatggtcttcagaaaatccttatatgcta
tcaacattggcgccaagattatggcctttcatgagacatagtatcacttcagtccgttat
tcagctatccggactttggagcgattgcttgaagccgaatataagaggagcattgctgag
tcatctagctctttctggccttcatttattttgggtgatactctcaggattgttttccag
aatttgctgcttgaatcaaatgaggagatcgtgcagtgctcaggcagggtttggaggatc
cttctccagtgcccggtggaagacttggaagatgcttcaaaggcatatttttcttcctgg
ttggagttagcaactactccatatggttcatcattggatactgcaaaaatgttttggcct
gtagctcttcctcgcaaaagccacttcaaagcagctgcaaagatgcgagctgtgaaatcg
gaaaacgattcccttaaaagcatatgctcagattcaggtgaaggcactactgtggtggag
aaaagtggagaggcttccaccagcagtggaaagattgtggttggtgctgatgtcgacatg
tcggtcacgtatacacgcgttgttactgctacagtcttgggcgctttagcttctaggctg
cgtgaaggttctttgaaattttttattgaccccttatggaaggcgcttacctctctatct
ggagttcaacgcgaggtagcttcaatggtgcttatttcttggtttaaagaactgaaaacc
aggaacattttggatatggatggggtcgttgctggcatctctagtaattttaggagctgg
ttgttggatttgttaggctgcactaatcctgcttttcctacaaaagattctcttcttcct
tacattgaactctcaagaacatatgataaaatgcgcaatgaagctcgtcaactgtacctt
gtgaccgagtcatctgacatgtttaaagatttgttatcatccaccccggttgacctggat
aatctcagtgcggatgatgcaatgaattttgcatctaaacttcaattttcaagtattaat
actgggggggaggaatctgctgagcagaacagtctggacgaactagaaacattcaaacag
aggcttttgaccacttctgggtatttgaaatgcgtccagaataatttgcatgttactgtc
tcttctttactggctgctgctgttgtctggatgaatgagcttcccgtgaaactgaatcca
attattttgcctttgatggcttctattaagagagaacaggaggagatattacaaagtaag
gcggctgaggctcttgcagagcttatctatcgttgtatgggacggaagcctggaccaaat
gataagttaattaagaacctctgtagtttgacatgcatggatccttgtgagacacctcaa
gccggaattttgaattctatagaaataattgaagagcatgatcttctatcctcaggaagt
agcagtaatagacataaatcaaaagttcatatgctctcccctggtgaagatcgttcaaag
gttgagggcttcatcagtagacgtggatctgaacttgccttgaagttcttatgtgaaaaa
ttgggtggatccttgtttgaaaagctacctaagctgtgggactgcctagtggaagttctt
aagccttgtaatcttgaaggcatgactgcagaagatgaaaggcttattactcaagctatt
gagttggttaaggatcctcagaacttgattaacaatatccaggtagtccgttctattgca
ccactgctggatgagacattaagaccgaaactcctcactctccttccatgcattttcaga
tgtgttcgtcattcacatatagctgtgagattagctgcatctagatgtattacaaccttg
gccaagtcaatggcattggatgtgatgggttcagttattgagaatgttgtgcctatgtta
ggtgacgttacatctgtacattctaaacaaggagctggcatgcttgtcagtttgcttgtc
cagggacttggtatcgagctggttccatatgctccccttttggtagttccccttctgagg
tgtatgagtgattcagatcattctgtcagacagagtgtgacacatagttttgccaccctt
gtgcctctacttccattagcacgtggtgtttctcctcctgttggtcttagtgaacaccta
tcaagaagtcaagaagatgttaaatttttggagcagctaattgacaactctcatattgac
gattacaagctctcaactgaactaaaggtgacattgagaaggtaccaacaagaaggtata
aactggttggcatttttgaagcgctttagtcttcacgggatattatgtgatgacatgggc
cttggtaaaacccttcaagcatcagcaattgtggcatctgatgtagcagagcacattgct
ctaaatagttcccaggaactacctccatccttgataatatgcccctcaacccttgttggc
cactgggtttatgaaatagagaagtttattgacggttctttgcttaccaccctccagtat
gttggttctgcacaagaacgcatttctctacggtctcagtttaagcagcataatgttatt
gtgacatcatatgatgtcatccgcaaagatgttgattatcttagacagctgttttggaac
tattgcattctagatgagggacatatcataaagaattctaagtcgaaaataacagttgct
gttaaacaattgaaggcacaacaccgcctcattctgagtggaacaccaatacagaataac
gtgttggatctgtggtcactctttgactttcttatgccagggtttcttggaactgaaaga
caatttcatgcctcctacgggaaaccactactagctgccagagatcccaaatgttcagcc
aaggatgctgaagcaggtgtgcttgctatggaagcattgcacaagcaggtgatgcctttt
ctccttcgccggactaaagatgaagtcttatctgatttgccagagaaaattattcaggat
agatactgtgacctgagtcctgttcagctaaaactctacgaacaattttctggttcacat
gtaagacaagaaatttccagcatggtgaagcacaatgaatcagatgcaagtcaaaaaaat
gatttgccaaaagcatcttctcatgtattccaggcacttcaatacttgcttaaactttgt
agtcaccctttgctcgtgtttggggagagagtttcagaatccctctcatctattgtgtca
gatctcttctctcctggtgctgacattgtttcagaactccatcaactccaccactctccc
aaattagtcgccttgcaggagatcctttcggagtgtggaattggtgttgattcaggttct
gaaggccctattggtgtaggacagcacagagtcctgatatttgcacagcataaggccttg
ttggatatcattgagagagacttgtttcaaaatcatatgagaaatgttacttacttgagg
ctggatggatcagttgaaccagaaaagcgctttgacattgtgaaagccttcaattcggat
cctactatagacgctttactgcttactacacatgttggtgggcttggtttgaacctgaca
tcagctgatacccttgtgttcatggagcatgactggaatccaatgcgagatcaccaggct
atggatcgagctcacaggttgggccagcgaaaagttgtaaatgttcaccgtctcattatg
cgaggaaccttggaagaaaaagtaatgagtctccaaaggttcaaagtgtcagttgccaat
gcagtgatcaatgcagacaatgcaagtttgaaaacgatgaatacagatcagttacttgat
ctatttacttcggcagaaagcaaaaagggagccggtagatccaaaagaactgatgaaaat
tctgatgtggactcaatcttgccacgtaatgggaagggattgaaagccattctcggagga
ttggaggagctttgggatcagtcacaatacacggaggagtataacctgggccagttctta
gcaaagcttaatggttaa
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