Lycium barbarum (goji berry): 132635571
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Entry
132635571 CDS
T09483
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lbb01001
]
132635571
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132635571
Enzymes [BR:
lbb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
132635571
Protein kinases [BR:
lbb01001
]
Serine/threonine kinases: Other
Other
132635571
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
132635571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
LisH
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML_2
EIF3I
Motif
Other DBs
NCBI-GeneID:
132635571
NCBI-ProteinID:
XP_060207984
LinkDB
All DBs
Position
4:23552489..23567446
Genome browser
AA seq
1960 aa
AA seq
DB search
MEEEEPQQQQSLAAEERQPEAPAPAPAEEHEEEEEGEEDEEESENEGLIIKAQALMDKIT
ALPDNPNPNTIHALSSLFETQESSYMEESGHSASSNGRASHNVGRLGNLIRDNDEFFELI
SSKFLSERRYSVSVKAAAARLLFSCSLTWTYPHVFEDPVLENLKSWTMDDTTRLSGDDHY
WKHESGDRRSSDSEMLKTYSTGLLAVCLASGGQVVEDVLTSGLPAKVMRYLRIRILGETT
TSQRDATSLLDGKASSTGTGVRSREECRSRFRQVAESSHLDIPRVAEDTDKDRDRSASRH
MRGDERWADEEPPDSMAVDDNYQADADGEERWHIRDLRDGKAKPGNRPLREDEHDESARD
DLSRRRVNRGWTRHRGRGRVTEGVPDNEAALTSPGSASRLGEQSRSRNLTRNQELRRATD
NKKNLSRTNVDGFAMERDENDECFRECKVGSKDITDLVKKALRAAETEAKAANAPTEAVK
AAGDAAAEVVKSAAFEEFKKTNDEEAAVLAASKAASTVIDAAIAVEVSRSAICEGESQDT
KATAQEANEDVDEFFILDSDSLAKLREKFCIQCLIILGEYVEVLGPVLHEKGVDVCIALL
QCNSKHKEGCKISLLLPDVLKLICSLAAHRKFAAVFVDRRGMQKLLAAPRALQTFSGLSS
CLFAIGSIQGIMERVCALPSNIIDQVVELALQLLGCPQDQARKNAALFFAAAFVFRAVLD
AFDAQDGLQKMLNLLQDAALVRSGVSSGALTASGSLRSDRSPPEVLTASEKQIAYHTCVA
LRQYFRAHLLLLVDSIRPNKSVRSAARNIPSVRAASKPLDISNEAIDAVFRLIQRDRRLG
PAAVRARWTVVEKFLSSNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPYSRKLI
VNATLSNDRVGIAVILDAANSAGYVEPEIVEAALNVLVCLVCPPPSISNKPSVSTQAQQT
NAIQSANTPGVETRERNPDRCETRDRNVERFLPDQAVNIPSQNENRERNGESTLSDRGST
AVSGTSAVGGTSQGPVSTVTSGLVGERRISLGAGAGCAGLAAQLEQCYRQAREAVRANNG
IKVLLQLLQPRIVTPPAAIDCLRALACRVLLGLARDDTIAHILTKLQVGKKLSELIRDSG
NQTPGGEQNRWQAELSQVAIELIGVVTNSGRASSLAATDAATPTLRRIERAAIAAATPIT
YHARELLLLIHEHLQASGLTDTATMLLKEAQLTPLPSLAAPSSLAHQTSGQETSSVQIQW
PSGRAQGFLTAKPKLPSLDEDGGLKSESLVCSSRRKPLIFSSARSQSSKSLPVEVSPAAS
SFKFSNSKKCVTPIATSETPSLSSVKSGGDPDIIFKTPIVLPMKRKLTDLKEGGSVPSVK
RLNTGEHAVRSPVCVTPNAVRRGSLPSDPNMPSTPNSTLREIHNRPGSSAFPTEGDDTPM
VSSSQHGLLSDSQPSNAERLTLDSVVVQYLKHQHRQCPAPITTLPPLSLLHPHVCPEPKR
SLDAPSNVTSRLSTREFRSLNGGTHGRRKDRQFVFSRFRPWRTCRDDAGVLLTCVSFMGD
SSQIAAGTHSGELKIFDSNSNSILESFTSHQAPLTLLQSYLSGETQMLLSSSAHDVRLWD
ATNVSAGPRHSFEGCKAARFSNCGTTFAALSSEPSRREILLYDVQTCQEELKLTDTSSIP
SGRGHMYSLVHFSPSDNMLLWNGVLWDTRGSGPIHRFDQFTDYGGGGFHPAGNEVIINSE
VWDLRNFRLLRSVPSLDQTVITFNASGDVIYAILRRNLEDVMSAFQTRRVKHPLFAAFRT
VDAVNYSDIATIPVDRCVLDFATEPTDSFVGLVTMDDQDEMYSSARVYEIGRRRPTDDDS
DPDDAESDEEDDEDDDDIDEEAILGTDLDGDGESDADDLSNDDDSVSELDDEEDEDGDFM
VDGVDFGGAAGLLEIVTDGEDDDDSELIESFSSGDDDDLM
NT seq
5883 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaggagccgcagcaacaacaatcattggcggcggaggagcggcagccggag
gcgccggcgccggcgccggcggaggaacatgaggaggaagaagaaggagaggaggatgaa
gaggaatcggagaatgaagggttgatcattaaggcacaagcgttaatggataaaattact
gctttgcctgataaccctaatcccaatactattcatgctctctcttctctttttgaaact
caagaatctagttacatggaagagagtggtcattctgcctctagtaatggccgagcttcc
cataatgttggacgactagggaaccttatccgggacaatgatgaattctttgaactgata
tcgtcaaagttcctatctgagaggagatattcagtttctgtgaaggctgctgctgcaagg
ctgctctttagttgttcactaacttggacgtatccacatgtttttgaagaccctgtgctg
gaaaatttaaaaagctggacaatggatgacacaaccagattgtctggtgatgatcattat
tggaagcatgagtcaggtgatcggaggtcctctgattctgagatgctgaagacatactct
actggacttcttgctgtgtgtttggcgagtggtggtcaagtagttgaggatgtattaaca
tctgggctcccagcaaaagttatgcgctatcttcggattagaattttgggggagaccacc
acaagccaaagagatgcaacatctttgttggatggcaaagcatcatctacaggtactggt
gtaagatctagagaggaatgtagaagtagattccggcaggttgccgaaagttctcatttg
gatattcccagagtagccgaagatacagataaggaccgcgatagaagtgccagtaggcat
atgcgtggggatgaacgttgggctgatgaagagccacctgattctatggctgttgatgat
aattatcaggcagatgcagatggtgaagaaagatggcatattagagatttacgtgacgga
aaggcaaagcctggtaacagacccctaagggaagacgagcatgatgagagtgctagagat
gatttatcaagacgcagggtgaatcgtgggtggacaagacacagaggacggggaagggtg
actgagggcgttccggataatgaagcagctttgacctctccaggttctgcaagtagattg
ggtgagcaatctcgcagcagaaatttgaccaggaatcaagaattgagaagagcaactgat
aacaagaagaatttgagtaggacaaatgttgatggttttgcgatggagagggacgagaat
gatgaatgtttccgagaatgtaaagttggctccaaggatatcacagatctggtgaagaaa
gctcttagagctgctgaaacagaagcaaaagcagctaatgctccaactgaagctgttaaa
gcagctggtgatgctgctgcagaagtagtcaagagtgctgcttttgaggagtttaagaag
acaaatgatgaggaggctgcagttttggctgcttcaaaagctgcatccacagtcattgat
gctgctattgctgttgaagtttcaaggagtgctatttgtgaaggtgaatcacaagacaca
aaagcaacagcacaagaagcaaatgaggatgttgatgaattcttcattctggatagtgac
tctcttgcgaagttgagagagaagttctgcatccagtgtcttattattttgggagagtat
gttgaagtacttggtcctgtgttgcacgaaaaaggagtggatgtgtgtattgcactattg
cagtgtaattccaaacataaagaggggtgcaaaatttcgcttcttttgcccgatgttctg
aagctaatctgttctttggctgcgcatcggaaatttgctgcagtatttgtggatcgtagg
ggcatgcaaaaattgcttgctgccccaagagctcttcagactttttctggtctttcttca
tgcttattcgcaatagggtcaattcagggaataatggaacgcgtttgtgctcttccttca
aacattatcgatcaggtggttgagttggcgcttcagcttcttggatgtcctcaagatcaa
gccagaaaaaatgctgctttattttttgcggctgcatttgttttcagagctgtcctagac
gcttttgatgctcaggatggcttacagaaaatgcttaatcttttgcaagatgctgcatta
gtgagatctggagtttcttctggggcattaactgcttcagggtcattacggagtgacaga
tcgccaccagaggtgctgaccgcttctgagaagcagatagcttatcacacctgtgtcgca
cttcggcagtacttcagagcacatcttctcttgctggtggattcaattcgtcctaataaa
agtgttcgcagtgctgcacgaaatatcccgagtgttagggctgcgtctaagccgcttgac
attagtaatgaggctatcgatgcagttttccgtttaatacagagagataggagacttggt
cctgcagctgtcagggcccgctggacagtagttgaaaagtttttaagttccaacgggcat
attacgatgttggaattatgtcaggctccacctgttgagcgttatttgcatgacttgctt
cagtatgctctcggtgtacttcatatcgtcactttagtaccttacagccgtaaacttatc
gtcaatgcaacattaagcaatgatcgtgtgggtatagccgttatattggatgcagctaac
agtgctggttatgtagaacctgagattgttgaagcagcattgaatgtgttagtttgtctc
gtgtgtcctccaccttcaatcagcaataaaccatctgtgtctacacaagcacagcaaacc
aatgctatccaatctgcaaatacgcctggtgtggagaccagagaacggaatccagatcgg
tgtgagaccagggacaggaatgtggagcggtttcttccagatcaggctgttaatatcccc
agccagaatgaaaatagagagagaaatggagaatctactttatcagaccgtggaagcaca
gcagtttctggcacatctgcggtcggtggcacttctcaaggccctgtgtctacagtgaca
tcaggattagttggagaacgaagaatatcactaggtgcaggagctggttgtgctggcctc
gctgctcagcttgaacaatgttaccgtcaagcgagagaagctgttcgggccaacaatggt
attaaggtcctcctgcagctcctccagccacggatagttactcctccagctgcaattgac
tgtcttcgtgctcttgcttgccgagtacttcttggtttagcaagagatgatacaattgca
catatattaacaaaacttcaggttgggaagaagttgtcagaactcatacgagattcagga
aatcagacccctggcggtgaacagaaccggtggcaagcagaactttcacaggtggctatt
gagcttattggggttgtaactaattctgggcgtgcaagttccctggctgccacagatgct
gcgacgccaacattaaggcgtatagagagagctgctatagctgctgctactccaatcaca
tatcatgcaagggagcttttactcctcatccatgaacacctacaagcttctggtttgaca
gatactgcaactatgcttctaaaggaggctcagttgacacctttgccatctttagctgct
ccgtcatctctggcacatcagacatcagggcaggagacatcgtcagttcaaattcagtgg
ccatctggtcgtgcacagggattcttgacagctaaaccgaaactcccatcattggatgag
gatggcggattgaaatctgagtcacttgtctgttcttcaagaaggaaaccattgatattt
tcatctgctcgtagtcagtcctcgaaatctcttcctgttgaagtctctccagcagcatca
agcttcaaattcagtaattcgaaaaagtgtgtcacacctatagctacatcagaaactcca
tccctatcttcagtaaaatctggcggagatccagacatcatatttaaaactcctattgta
ttgccaatgaaacgtaagttaactgacctgaaggaaggtggatcagtgccatcagttaag
cgactcaatactggtgaacatgcagtcaggtctccagtttgtgtcactccaaatgcggtc
cgtagaggcagtctaccatcagatcctaatatgccttcaacaccaaattctactttgaga
gagatccataatcgacctggctcaagtgcttttccaactgaaggtgatgatactccaatg
gtgtcgtcttctcaacatggtcttctaagtgattcacaaccctcgaatgcagagcgttta
accttggactctgtggttgttcagtacttgaagcaccagcatcgccaatgtcctgctccc
atcacaacgttacctccgctttcgctcttgcaccctcatgtctgtcctgaaccaaaacga
agccttgatgcaccatcaaatgtgacatcacggcttagtactcgtgaatttagaagtttg
aatggtgggacacacggaaggcgtaaggatcgacaattcgtcttcagtagatttagacca
tggcgaacttgcagggatgatgctggtgtcttattgacatgtgtctcttttatgggagat
tcctcacaaattgctgctggcacccattctggagagctgaaaatatttgactctaacagc
aacagtatcttagaaagcttcaccagccaccaggcacctttaacactactacagtcatac
ctttctggcgagacacaaatgcttctgtcttcaagtgctcacgatgtgcggttatgggac
gcaactaatgtttcagctgggcctaggcattcatttgaaggctgtaaagctgcacgattt
agcaattgcggtacaacatttgctgcattgtcttcagagccatcccggcgcgagattctt
ctatatgacgttcaaacctgtcaagaggaactgaaacttacagacacatccagcatccct
tcaggccgaggacatatgtattcccttgtacattttagcccttctgacaatatgcttctc
tggaacggagtcttatgggatactcgtggttctggcccaattcatcgttttgatcaattt
accgactatggtggcgggggctttcatcctgctggcaatgaggtcatcataaactctgag
gtatgggatttgcggaacttcaggcttctgcgaagtgtaccatctttggaccagacggta
ataacatttaatgcgagtggtgatgtgatatatgccatcttaagaagaaatctcgaggat
gtcatgtcagcattccagacacgtcgtgttaaacatcctctctttgctgctttccgtaca
gtggatgctgttaactattctgacattgcaaccattccagtagaccgttgcgtccttgac
tttgcgacggagccaactgattctttcgttgggctggtcacaatggatgaccaagatgag
atgtattcttctgctagggtgtatgaaattggtcggaggaggccaactgacgatgattca
gaccctgatgacgctgaaagtgatgaagaggatgatgaagatgatgatgacattgatgag
gaagcaatccttggaacggatcttgatggggacggtgaaagcgacgcagatgatttgagc
aatgatgatgatagtgtgagtgagcttgatgacgaagaggatgaagatggagacttcatg
gtagatggtgtggactttggtggtgcagctggtttattggagattgtgacggatggtgaa
gatgatgatgacagtgagcttattgaatcctttagtagtggggatgatgatgatctcatg
tag
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integrated database retrieval system
