Lycium barbarum (goji berry): 132635607
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Entry
132635607 CDS
T09483
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 18-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lbb01002
]
132635607
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132635607
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132635607
Peptidases and inhibitors [BR:
lbb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
132635607
Ubiquitin system [BR:
lbb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
132635607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Tyrosinase
Motif
Other DBs
NCBI-GeneID:
132635607
NCBI-ProteinID:
XP_060208046
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All DBs
Position
4:complement(24616027..24629015)
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AA seq
780 aa
AA seq
DB search
MHVAVDLNSYLQLVLTAIAVVITLLYLVKSTASKYFVVDDGDSSNFDSSSSPSFGDRRRS
METPEGCVVCANITTKQCSRCKMVKYCSETCQRSHWNSGHKFQCKDFQLSGKGSSLQGSK
SSAVSLTHASGTSKILDHSKKELFPYEEFLELFNWDSPGFPPCGLLNCGNSCFANVVLQC
LTYTKPLVAYLLEKGHLRECRRNGWCFLCEFQHHVERVSRSQQPFSPINILSRLPNIGGN
LGYGKQEDAHEFMRFAIDTMQSLCLDEFGGEKAVPPNTQETTLIQHIFGGHLQSQVICTE
CSNVSNQFENMMDLTVEIHGDAESLEECLDQFTAREWLDGDNLYRCDGCNDYVKAWKRLM
VRRAPNILTIALKRFQSGRFGKLNKRVNFPETLDLRPYMSEAGDGNDIYKLYAVIVHVDM
LNASFFGHYICYIKDFCGSWYRIDDCKVVSVDLDEVLSQGAYMLLYSRIYPRPTCLFPLE
LVKKEDHPTVKVEDKPGSTDHLVKCLRATVSPATVVDSVSPPTVNGSEAKIIRDEEELFS
LTNPEGGMEDQEVDFGASSLVQQEMQDVKPYSAAIGSSCPRVVSNSSFGASTSAEVEIQK
CEIKSPLSDRKNDTDPCQRTTDDCLLNSSFNEDSVATNGEMLDDASSSASKFGGISHNAK
LQKSTEMPDKDNQNEKISPHGIHNAVLKSDGGSISGAKFKPLFAPGFLQKRPLNRCAKKD
VSGEVCHNSTLNGLTNACTKPELSGENHIDMDDQDTNVEVKNSVSSNASIGQAAISLNET
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtagcagtggatctgaattcctacttgcaattggtattgacggctatagctgtc
gtaattacgctactttaccttgtcaaaagcaccgcttcaaagtacttcgttgttgacgac
ggcgactcctctaattttgactcttcttcttcgccgagttttggtgatcggaggaggagc
atggaaacccccgaaggttgcgttgtatgtgctaatatcaccactaaacaatgttctcgt
tgcaagatggttaaatactgctctgaaacttgccaaagatctcattggaactctggacac
aaatttcaatgcaaggattttcagttatctgggaaaggcagttctttgcaagggagtaaa
tcttctgcagtttcactgactcatgctagtggaacctctaagatactagaccattcgaag
aaggaacttttcccatatgaggaattcttggaactctttaactgggatagcccaggtttc
ccaccttgtggactccttaattgcggaaacagttgctttgctaatgtggttctacaatgt
ctgacatatactaagccacttgttgcctacttgttggagaaaggccatttgagagaatgt
aggcggaatggttggtgcttcctttgcgaatttcaacaccatgtagaacgggttagtcgg
agtcagcagcccttctcaccaatcaacatactttcacggttgcctaatattggtggtaat
cttgggtatggtaaacaggaggatgcccatgaatttatgaggtttgcgattgacacgatg
cagtctctgtgcctcgatgaatttggtggagagaaggctgttcctcctaacacacaggag
acaacacttattcagcacatatttgggggtcacctgcagtctcaggtcatatgtacagaa
tgcagtaatgtttcaaatcagtttgaaaatatgatggatctgacagtggagattcacggg
gatgctgaatctttggaggaatgcttagatcaattcacagcaagagaatggcttgatgga
gataacttgtacagatgtgatggatgcaatgactatgtcaaggcgtggaagcgcctaatg
gtcaggagggcaccaaatatcttaacaattgccttgaaaaggtttcagagtggtaggttt
ggcaaattaaataagagggttaatttccctgaaacattggatctccgtccgtacatgagc
gaagcaggagacggcaatgatatttacaagctatatgcagttattgttcatgtggatatg
ttgaatgcgtcatttttcggccattacatatgctatatcaaggatttctgcggaagttgg
tacaggatcgatgactgcaaggtggttagtgttgatttggatgaagtgctttcgcaggga
gcatacatgctcttatatagcaggatctaccctcggccaacatgcttatttcctcttgaa
cttgtgaagaaagaggaccaccccacagttaaagtggaagacaagccgggttcgacagac
caccttgttaaatgtctccgtgcaacagtgtctccagctacagttgttgattctgtttca
ccgccaactgttaatggttcagaagctaagattatcagggacgaagaggagctattctcc
ttgaccaaccctgagggtggaatggaggatcaggaggtagattttggggcaagttctctt
gtccagcaggagatgcaggatgttaaaccatacagtgcagctataggaagttcttgccct
agagtggtatccaatagttcttttggtgctagcacttcggctgaagttgagatccagaaa
tgtgaaataaaatcccccttgtctgaccgtaaaaatgatactgacccatgtcaaagaacc
accgatgactgtctgttgaattcttcctttaatgaggattctgttgccacaaatggtgaa
atgctggatgatgcttcatcctctgcctcaaaatttggtggcatctctcacaatgcgaag
ttacagaagtccactgaaatgccagacaaagataaccagaacgaaaagatttcgccacac
ggaattcacaatgcggtcctgaaatcggatggagggagtatttctggcgcaaagtttaag
ccactgtttgcccctggctttcttcagaaacgcccattgaaccgatgtgccaaaaaggat
gtctcgggagaagtttgccataatagcacccttaatggtctgacaaatgcctgtaccaag
cctgaattgtctggtgaaaaccacattgatatggatgaccaagatactaatgtggaagta
aaaaattcggtgtctagtaatgcgtcaattggacaagctgcaatttctcttaatgagact
taa
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